C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 8-oxoguanine DNA-glycosylase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030271 Ogg1 10090 + 6:113326972-113335068 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032406 Ogg1-001 113326972-113334188 protein_coding
  ENSMUST00000129871 Ogg1-004 113326985-113328823 retained_intron
  ENSMUST00000136263 Ogg1-002 113326999-113334184 retained_intron
  ENSMUST00000147945 Ogg1-003 113333318-113335068 protein_coding
  ENSMUST00000154350 Ogg1-005 113327107-113329299 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032406ENSMUST00000136263ENSMUST00000154350
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032406 14.095±0.01 7.960±0.00 9.208±0.00 10.523±1.59 9.033±0.17 8.249±1.04 5.861±1.57 13.013±0.31 4.020±0.41 11.494±1.88 6.307±1.37 8.112±4.08
ENSMUST00000136263 N/A 11.546±0.00 N/A N/A 8.223±0.00 N/A 2.018±0.20 N/A N/A 11.970±3.14 N/A 6.068±0.89
ENSMUST00000154350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.267±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WL CIL_0002WL_0002 CGP 6:113307181-113335068
CIL_000243 CIL_000243_0002 CGP 6:113326972-113343984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000702 TAS oxidized base lesion DNA N-glycosylase activity
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0002526 IEA acute inflammatory response
GO:0003684 IEA damaged DNA binding
GO:0005515 IEA protein binding
GO:0005634 IMP nucleus
GO:0005654 ISS nucleoplasm
GO:0005739 IMP mitochondrion
GO:0006281 IMP DNA repair
GO:0006284 IMP base-excision repair
GO:0006289 IEA nucleotide-excision repair
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0006979 ISS response to oxidative stress
GO:0007568 IEA aging
GO:0008017 IDA microtubule binding
GO:0008534 IMP oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0009314 ISS response to radiation
GO:0016363 ISS nuclear matrix
GO:0016607 ISS nuclear speck
GO:0019104 TAS DNA N-glycosylase activity
GO:0032355 IEA response to estradiol
GO:0033158 ISS regulation of protein import into nucleus, translocation
GO:0034039 IMP 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
GO:0042493 IEA response to drug
GO:0043066 IEA negative regulation of apoptotic process
GO:0045471 IEA response to ethanol
GO:0051593 IEA response to folic acid
GO:0071276 IEA cellular response to cadmium ion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060002 ogg1 8-oxoguanine DNA glycosylase protein_coding Danio_rerio
ENSG00000114026 OGG1 8-oxoguanine DNA glycosylase protein_coding Homo_sapiens

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