C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000243_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114026-ENSG00000114026 CGP 9606 3:9749944-9788219
GeneTranscriptPositionBiotype
ENSG00000134072 (CAMK1)
calcium/calmodulin-dependent protein kinase I 		ENST00000256460 (CAMK1-001) 9757342-9769977 protein_coding
ENST00000397277 (CAMK1-003) 9757392-9769961 nonsense_mediated_decay
ENST00000411972 (CAMK1-006) 9761688-9769992 protein_coding
ENST00000421120 (CAMK1-005) 9757348-9761725 protein_coding
ENST00000482803 (CAMK1-004) 9757354-9758047 retained_intron
ENST00000496534 (CAMK1-002) 9757347-9760570 retained_intron
ENSG00000171148 (TADA3)
transcriptional adaptor 3 		ENST00000301964 (TADA3-001) 9779860-9792747 protein_coding
ENST00000343450 (TADA3-002) 9783128-9792736 protein_coding
ENST00000439043 (TADA3-009) 9789885-9792783 protein_coding
ENST00000440161 (TADA3-004) 9780256-9793011 protein_coding
ENST00000492103 (TADA3-003) 9779967-9788083 retained_intron
ENST00000492635 (TADA3-008) 9789703-9792408 processed_transcript
CIL_000243_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030271-ENSMUSG00000030272 CGP 10090 6:113326972-113343984
GeneTranscriptPositionBiotype
ENSMUSG00000030271 (Ogg1)
8-oxoguanine DNA-glycosylase 1 		ENSMUST00000032406 (Ogg1-001) 113326972-113334188 protein_coding
ENSMUST00000129871 (Ogg1-004) 113326985-113328823 retained_intron
ENSMUST00000136263 (Ogg1-002) 113326999-113334184 retained_intron
ENSMUST00000147945 (Ogg1-003) 113333318-113335068 protein_coding
ENSMUST00000154350 (Ogg1-005) 113327107-113329299 processed_transcript
ENSMUSG00000030272 (Camk1)
calcium/calmodulin-dependent protein kinase I 		ENSMUST00000032409 (Camk1-001) 113334124-113343984 protein_coding
ENSMUST00000149497 (Camk1-005) 113334137-113343904 retained_intron
ENSMUST00000153067 (Camk1-006) 113334128-113336621 retained_intron
ENSMUST00000155543 (Camk1-007) 113338123-113343978 protein_coding
ENSMUST00000156512 (Camk1-004) 113334128-113340917 retained_intron
ENSMUST00000156853 (Camk1-003) 113340903-113343963 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000243_0001ENSG00000134072ENST00000256460ENST00000397277ENST00000411972ENST00000421120ENST00000482803ENST00000496534ENSG00000171148ENST00000301964ENST00000343450ENST00000439043ENST00000440161ENST00000492103ENST00000492635CIL_000243_0002ENSMUSG00000030271ENSMUST00000032406ENSMUST00000129871ENSMUST00000136263ENSMUST00000147945ENSMUST00000154350ENSMUSG00000030272ENSMUST00000032409ENSMUST00000149497ENSMUST00000153067ENSMUST00000155543ENSMUST00000156512ENSMUST00000156853
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000243_0001ENSG00000134072ENST00000256460ENST00000421120ENSG00000171148ENST00000301964ENST00000440161ENST00000492635CIL_000243_0002ENSMUSG00000030271ENSMUST00000032406ENSMUST00000136263ENSMUST00000154350ENSMUSG00000030272ENSMUST00000032409ENSMUST00000149497ENSMUST00000153067ENSMUST00000155543ENSMUST00000156512
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134072 ENST00000256460 N/A N/A 10.778±0.00 30.488±1.34 N/A N/A N/A 7.622±0.00 N/A N/A N/A N/A N/A N/A
ENST00000397277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.754±0.00 N/A 182.286±0.00
ENST00000482803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171148 ENST00000301964 28.386±0.00 42.487±0.00 N/A 25.226±0.00 32.672±0.00 35.100±0.00 16.029±13.94 38.337±0.00 N/A N/A N/A 92.121±3.27 32.713±8.74 56.794±0.00
ENST00000343450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440161 N/A N/A N/A 20.522±0.00 10.274±0.00 14.477±0.00 1.791±0.00 7.566±0.00 8.443±0.00 N/A 3.349±0.00 24.298±13.15 29.430±0.00 110.757±0.00
ENST00000492103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.789±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030271 ENSMUST00000032406 14.095±0.01 7.960±0.00 N/A 9.208±0.00 10.523±1.59 9.033±0.17 N/A 8.249±1.04 5.861±1.57 13.013±0.31 4.020±0.41 11.494±1.88 6.307±1.37 8.112±4.08
ENSMUST00000129871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136263 N/A 11.546±0.00 N/A N/A N/A 8.223±0.00 N/A N/A 2.018±0.20 N/A N/A 11.970±3.14 N/A 6.068±0.89
ENSMUST00000147945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.267±0.00
ENSMUSG00000030272 ENSMUST00000032409 60.276±9.99 53.361±11.20 45.495±6.43 32.604±10.95 35.842±7.18 33.266±2.92 42.403±3.44 34.437±4.03 9.422±1.54 53.665±7.76 17.594±1.65 43.725±11.43 22.237±12.53 N/A
ENSMUST00000149497 N/A N/A N/A 46.630±0.00 N/A N/A N/A N/A N/A N/A N/A 27.214±15.05 11.646±0.83 1.563±0.00
ENSMUST00000153067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.542±0.00 N/A N/A
ENSMUST00000155543 N/A 32.337±1.62 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A
ENSMUST00000156853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading