C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030352 Tspan9 10090 - 6:127961396-128143594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032503 Tspan9-003 127963907-128143560 protein_coding
  ENSMUST00000112171 Tspan9-002 127962802-128136709 protein_coding
  ENSMUST00000112173 Tspan9-001 127961396-128143563 protein_coding
  ENSMUST00000123786 Tspan9-009 127965747-128034592 protein_coding
  ENSMUST00000127075 Tspan9-007 128081837-128143594 processed_transcript
  ENSMUST00000127105 Tspan9-005 127967166-128124316 protein_coding
  ENSMUST00000145940 Tspan9-006 127967081-128143553 processed_transcript
  ENSMUST00000146268 Tspan9-004 127966437-128140746 protein_coding
  ENSMUST00000154375 Tspan9-008 127966431-128083482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032503ENSMUST00000112173ENSMUST00000123786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.110±23.12 0.657±0.04
ENSMUST00000112173 9.347±2.47 18.628±0.00 32.814±0.00 7.725±2.46 6.862±1.88 3.380±0.33 9.069±1.23 14.997±11.68 2.079±0.00 47.869±8.82 2.340±0.99 16.623±9.26 28.630±0.00 0.310±0.00
ENSMUST00000123786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.957±18.31 0.388±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0008150 ND biological_process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0097197 IEA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025299 tspan9a tetraspanin 9a protein_coding Danio_rerio
ENSDARG00000045706 tspan9b tetraspanin 9b protein_coding Danio_rerio
ENSG00000011105 TSPAN9 tetraspanin 9 protein_coding Homo_sapiens

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