C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tweety homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030428 Ttyh1 10090 + 7:4119408-4136706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032594 Ttyh1-007 4119754-4135330 nonsense_mediated_decay
  ENSMUST00000079415 Ttyh1-002 4119585-4135333 protein_coding
  ENSMUST00000119661 Ttyh1-005 4119530-4135330 protein_coding
  ENSMUST00000126971 Ttyh1-006 4119530-4134949 retained_intron
  ENSMUST00000128317 Ttyh1-011 4130619-4131890 retained_intron
  ENSMUST00000129423 Ttyh1-001 4119533-4136706 protein_coding
  ENSMUST00000130150 Ttyh1-003 4119408-4125588 processed_transcript
  ENSMUST00000132400 Ttyh1-014 4128226-4130119 retained_intron
  ENSMUST00000134536 Ttyh1-004 4122149-4135407 retained_intron
  ENSMUST00000139789 Ttyh1-012 4131137-4132034 retained_intron
  ENSMUST00000140637 Ttyh1-013 4133030-4133972 retained_intron
  ENSMUST00000148760 Ttyh1-008 4119556-4125619 processed_transcript
  ENSMUST00000148951 Ttyh1-010 4129246-4133197 retained_intron
  ENSMUST00000151959 Ttyh1-009 4120220-4125560 processed_transcript
  ENSMUST00000153673 Ttyh1-015 4119622-4128265 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032594ENSMUST00000079415ENSMUST00000119661ENSMUST00000126971ENSMUST00000129423ENSMUST00000130150ENSMUST00000134536ENSMUST00000140637ENSMUST00000148760ENSMUST00000148951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032594 0.287±0.00 N/A N/A 36.444±18.66 N/A 1.616±0.35 0.123±0.00 0.293±0.12 N/A 0.228±0.00 0.190±0.08 0.425±0.10 0.493±0.11 4.642±2.15
ENSMUST00000079415 N/A N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A 0.130±0.00 N/A 0.335±0.01 N/A N/A
ENSMUST00000119661 N/A 0.967±0.44 0.836±0.03 22.040±2.03 1.221±0.59 N/A 0.257±0.05 0.209±0.07 0.084±0.00 N/A 0.164±0.01 0.767±0.40 0.769±0.20 5.731±1.95
ENSMUST00000126971 N/A 0.231±0.00 N/A 38.380±0.00 0.391±0.03 N/A N/A N/A 0.098±0.00 0.178±0.00 0.174±0.03 0.578±0.23 0.825±0.00 1.758±0.00
ENSMUST00000129423 0.405±0.05 0.521±0.08 1.282±0.27 10.864±0.80 0.618±0.16 1.645±0.39 0.297±0.05 0.510±0.19 0.212±0.12 0.296±0.08 0.084±0.00 0.576±0.26 0.691±0.01 5.139±0.23
ENSMUST00000130150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.611±0.00 N/A N/A
ENSMUST00000134536 N/A 0.390±0.00 N/A N/A 0.315±0.00 N/A N/A N/A N/A 0.142±0.01 0.099±0.02 N/A 0.304±0.00 N/A
ENSMUST00000140637 N/A N/A N/A N/A N/A 12.630±2.32 1.283±0.00 2.890±0.00 0.742±0.00 N/A 0.455±0.00 3.851±0.00 N/A N/A
ENSMUST00000148760 N/A 2.604±0.95 N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A
ENSMUST00000148951 0.822±0.15 N/A N/A N/A N/A 11.720±1.81 0.996±0.17 0.726±0.00 0.623±0.12 0.665±0.00 N/A 2.421±0.00 3.239±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M5 CIL_0005M5_0002 CGP 7:4007073-4136706
CIL_0005M4 CIL_0005M4_0002 CGP 7:4119408-4148173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005509 IDA calcium ion binding
GO:0006821 IEA chloride transport
GO:0007067 IMP mitotic nuclear division
GO:0016337 IDA single organismal cell-cell adhesion
GO:0030868 IDA smooth endoplasmic reticulum membrane
GO:0031527 IDA filopodium membrane
GO:0031589 IDA cell-substrate adhesion
GO:0032433 IDA filopodium tip
GO:0034707 IEA chloride channel complex
GO:0044070 IEA regulation of anion transport
GO:0046847 IDA filopodium assembly
GO:0072320 IEA volume-sensitive chloride channel activity
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076804 ttyh1 tweety homolog 1 (Drosophila) protein_coding Danio_rerio
ENSG00000167614 TTYH1 tweety family member 1 protein_coding Homo_sapiens

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