C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tweety family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167614 TTYH1 9606 + 19:54415219-54436900 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301194 TTYH1-001 54415431-54436900 protein_coding
  ENST00000376530 TTYH1-002 54415450-54436719 protein_coding
  ENST00000376531 TTYH1-003 54415526-54436719 protein_coding
  ENST00000391739 TTYH1-006 54419196-54433711 nonsense_mediated_decay
  ENST00000423529 TTYH1-016 54415219-54422255 protein_coding
  ENST00000425969 TTYH1-008 54415510-54426768 nonsense_mediated_decay
  ENST00000445095 TTYH1-007 54415465-54426728 protein_coding
  ENST00000461302 TTYH1-013 54420668-54426733 processed_transcript
  ENST00000462757 TTYH1-017 54415840-54422248 processed_transcript
  ENST00000462769 TTYH1-011 54418262-54419536 processed_transcript
  ENST00000467939 TTYH1-015 54436005-54436717 processed_transcript
  ENST00000476757 TTYH1-012 54420699-54429353 processed_transcript
  ENST00000476863 TTYH1-014 54434960-54436328 processed_transcript
  ENST00000478036 TTYH1-018 54418389-54421343 processed_transcript
  ENST00000487134 TTYH1-005 54415512-54436719 retained_intron
  ENST00000489425 TTYH1-004 54426474-54436719 processed_transcript
  ENST00000492920 TTYH1-009 54430813-54436472 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301194ENST00000376530ENST00000376531ENST00000391739ENST00000425969ENST00000467939ENST00000476757ENST00000489425ENST00000492920
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301194 N/A N/A 31.153±0.00 N/A N/A 0.085±0.04 N/A N/A N/A N/A 0.159±0.00 0.385±0.00 N/A
ENST00000376530 0.050±0.00 N/A 126.053±0.00 18.692±0.00 0.771±0.53 0.162±0.00 N/A N/A 0.779±0.00 N/A 1.561±1.33 N/A 7.192±0.00
ENST00000376531 N/A N/A N/A N/A 1.372±0.00 0.196±0.00 N/A N/A N/A N/A 1.909±0.00 0.263±0.00 20.495±13.42
ENST00000391739 0.044±0.00 0.913±0.00 N/A N/A N/A 0.097±0.00 0.133±0.10 0.024±0.00 0.071±0.01 N/A 0.033±0.00 0.022±0.00 N/A
ENST00000425969 N/A N/A N/A N/A 3.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467939 0.172±0.00 N/A N/A N/A 1.214±0.00 N/A N/A N/A N/A N/A 1.278±0.00 0.931±0.62 46.230±0.00
ENST00000476757 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENST00000489425 N/A N/A N/A N/A N/A 0.273±0.00 0.452±0.00 0.058±0.00 N/A 0.110±0.00 1.289±0.00 0.111±0.00 N/A
ENST00000492920 N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A 0.779±0.00 N/A 12.638±4.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M5 CIL_0005M5_0001 CGP 19:54351384-54436900
CIL_0005M4 CIL_0005M4_0001 CGP 19:54415219-54462037

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005381 NAS iron ion transmembrane transporter activity
GO:0005509 IEA calcium ion binding
GO:0005886 TAS plasma membrane
GO:0006821 IDA chloride transport
GO:0006826 NAS iron ion transport
GO:0007067 IEA mitotic nuclear division
GO:0016021 TAS integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030868 IEA smooth endoplasmic reticulum membrane
GO:0031527 IEA filopodium membrane
GO:0031589 IEA cell-substrate adhesion
GO:0032433 IEA filopodium tip
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0034755 NAS iron ion transmembrane transport
GO:0044070 IDA regulation of anion transport
GO:0046847 IEA filopodium assembly
GO:0055085 TAS transmembrane transport
GO:0072320 IDA volume-sensitive chloride channel activity
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076804 ttyh1 tweety homolog 1 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000030428 Ttyh1 tweety homolog 1 (Drosophila) protein_coding Mus_musculus

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