C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: p21 protein (Cdc42/Rac)-activated kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040531 Pak4-202 ENSMUSG00000030602 10090 - 7:28399549-28598144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040531
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040531 11.079±1.09 19.951±1.03 11.551±1.22 10.697±4.79 10.498±3.95 16.751±5.26 4.100±1.30 10.690±1.32 4.545±1.38 10.880±0.50 1.889±0.31 14.859±4.75 20.272±15.04 40.168±4.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314471 SAMD4B-001 protein_coding Homo_sapiens 0 3546
ENST00000595476 SAMD4B-011 retained_intron Homo_sapiens 0 761
ENST00000596271 SAMD4B-014 retained_intron Homo_sapiens 0 523
ENST00000596319 SAMD4B-010 retained_intron Homo_sapiens 0 741
ENST00000596368 SAMD4B-004 protein_coding Homo_sapiens 0 1559
ENST00000598605 SAMD4B-012 protein_coding Homo_sapiens 0 403
ENST00000598913 SAMD4B-002 protein_coding Homo_sapiens 0 3120
ENST00000599712 SAMD4B-008 protein_coding Homo_sapiens 0 1214
ENST00000600018 SAMD4B-007 protein_coding Homo_sapiens 2e-37 158
ENST00000602243 SAMD4B-009 protein_coding Homo_sapiens 0 599
ENST00000610417 SAMD4B-201 protein_coding Homo_sapiens 0 3546
ENST00000611159 SAMD4B-202 protein_coding Homo_sapiens 0 3533
ENST00000614559 SAMD4B-203 protein_coding Homo_sapiens 0 3107

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