C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, ATPase, 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030603 Psmc4 10090 - 7:28041707-28050101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032824 Psmc4-001 28041707-28050101 protein_coding
  ENSMUST00000126528 Psmc4-004 28047257-28050056 retained_intron
  ENSMUST00000134486 Psmc4-006 28042588-28047349 retained_intron
  ENSMUST00000135482 Psmc4-002 28041717-28050056 retained_intron
  ENSMUST00000138512 Psmc4-003 28041716-28047022 retained_intron
  ENSMUST00000140053 Psmc4-005 28042665-28047518 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032824ENSMUST00000126528ENSMUST00000134486ENSMUST00000138512ENSMUST00000140053
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032824 53.210±6.71 51.859±1.61 47.761±15.51 74.022±7.89 37.702±0.75 41.184±3.91 32.806±1.94 49.498±2.25 54.874±15.79 34.105±1.44 44.828±1.13 63.299±6.64 97.879±37.95 20.355±2.16
ENSMUST00000126528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.713±0.00 N/A 8.547±0.00
ENSMUST00000134486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.942±0.00
ENSMUST00000138512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.871±1.62 N/A 6.320±0.00
ENSMUST00000140053 22.324±3.76 N/A N/A 67.859±28.64 17.911±4.89 24.215±4.61 14.733±0.00 17.124±0.00 21.537±3.58 17.627±0.69 N/A 43.996±10.54 139.780±0.00 11.711±2.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0016020 IEA membrane
GO:0016234 IEA inclusion body
GO:0016787 IEA hydrolase activity
GO:0022624 IDA proteasome accessory complex
GO:0030163 IEA protein catabolic process
GO:0031597 IEA cytosolic proteasome complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027099 psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein_coding Danio_rerio
ENSG00000013275 PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein_coding Homo_sapiens

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