C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032824 Psmc4-001 ENSMUSG00000030603 10090 - 7:28041707-28050101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032824 53.210±6.71 51.859±1.61 47.761±15.51 74.022±7.89 37.702±0.75 41.184±3.91 32.806±1.94 49.498±2.25 54.874±15.79 34.105±1.44 44.828±1.13 63.299±6.64 97.879±37.95 20.355±2.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0016020 IEA membrane
GO:0016234 IEA inclusion body
GO:0016787 IEA hydrolase activity
GO:0022624 IDA proteasome accessory complex
GO:0030163 IEA protein catabolic process
GO:0031597 IEA cytosolic proteasome complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000157812 PSMC4-001 protein_coding Homo_sapiens 0 1786
ENST00000455878 PSMC4-002 protein_coding Homo_sapiens 0 1437
ENST00000593455 PSMC4-003 retained_intron Homo_sapiens 0 1291
ENST00000596386 PSMC4-006 retained_intron Homo_sapiens 0 1171
ENST00000601194 PSMC4-005 retained_intron Homo_sapiens 0 351
ENST00000601697 PSMC4-004 retained_intron Homo_sapiens 0 1511

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