C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fatty acyl CoA reductase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030759 Far1 10090 + 7:113513834-113571511 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033018 Far1-001 113513834-113571511 protein_coding
  ENSMUST00000067929 Far1-003 113513861-113571511 protein_coding
  ENSMUST00000122890 Far1-006 113514098-113539390 protein_coding
  ENSMUST00000123591 Far1-004 113547459-113553143 retained_intron
  ENSMUST00000123845 Far1-002 113513861-113550505 retained_intron
  ENSMUST00000129087 Far1-005 113513861-113547581 protein_coding
  ENSMUST00000136158 Far1-008 113513877-113550040 protein_coding
  ENSMUST00000151133 Far1-010 113566100-113568205 retained_intron
  ENSMUST00000155183 Far1-009 113560915-113568150 retained_intron
  ENSMUST00000156554 Far1-007 113513881-113526343 retained_intron
  ENSMUST00000164745 Far1-201 113513862-113570458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033018ENSMUST00000067929ENSMUST00000123591ENSMUST00000136158ENSMUST00000164745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033018 3.366±2.34 1.260±0.48 23.164±3.92 11.769±5.44 3.706±1.42 5.623±1.83 1.566±0.12 5.207±0.71 9.005±2.01 5.055±1.75 1.489±0.26 7.080±2.88 4.943±1.79 N/A
ENSMUST00000067929 N/A N/A 4.324±0.91 N/A N/A 1.456±0.00 0.784±0.03 9.320±2.99 0.186±0.04 2.382±0.64 N/A 4.991±1.34 3.063±0.22 3.284±1.29
ENSMUST00000123591 2.926±1.61 1.595±0.39 N/A N/A 3.832±0.75 5.687±1.80 N/A N/A 0.271±0.15 3.834±0.33 N/A 10.994±2.74 N/A N/A
ENSMUST00000136158 N/A N/A N/A N/A N/A N/A N/A N/A 0.415±0.05 N/A N/A N/A N/A N/A
ENSMUST00000164745 1.610±0.54 1.348±0.00 N/A N/A 2.058±0.00 3.249±1.09 0.735±0.17 N/A 0.067±0.00 1.291±0.00 0.442±0.00 3.285±1.42 4.266±2.19 2.212±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PL CIL_0003PL_0002 CGP 7:113385576-113571511

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005777 IDA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0008611 IEA ether lipid biosynthetic process
GO:0010025 IDA wax biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0035336 IEA long-chain fatty-acyl-CoA metabolic process
GO:0046474 IEA glycerophospholipid biosynthetic process
GO:0050062 IDA long-chain-fatty-acyl-CoA reductase activity
GO:0055114 IEA oxidation-reduction process
GO:0080019 IEA fatty-acyl-CoA reductase (alcohol-forming) activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006899 far1 fatty acyl CoA reductase 1 protein_coding Danio_rerio
ENSG00000197601 FAR1 fatty acyl CoA reductase 1 protein_coding Homo_sapiens

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