C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acyl CoA reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033018 Far1-001 ENSMUSG00000030759 10090 + 7:113513834-113571511 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000033018
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000033018 3.366±2.34 1.260±0.48 23.164±3.92 11.769±5.44 3.706±1.42 5.623±1.83 1.566±0.12 5.207±0.71 9.005±2.01 5.055±1.75 1.489±0.26 7.080±2.88 4.943±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PL CIL_0003PL_0002 CGP 7:113385576-113571511

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005777 IDA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0008611 IEA ether lipid biosynthetic process
GO:0010025 IDA wax biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0035336 IEA long-chain fatty-acyl-CoA metabolic process
GO:0046474 IEA glycerophospholipid biosynthetic process
GO:0050062 IDA long-chain-fatty-acyl-CoA reductase activity
GO:0055114 IEA oxidation-reduction process
GO:0080019 IEA fatty-acyl-CoA reductase (alcohol-forming) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354817 FAR1-001 protein_coding Homo_sapiens 0 2591
ENST00000427163 FAR1P1-001 processed_pseudogene Homo_sapiens 0 1160
ENST00000524933 FAR1-004 retained_intron Homo_sapiens 0 797
ENST00000527202 FAR1-005 processed_transcript Homo_sapiens 0 809
ENST00000532502 FAR1-002 protein_coding Homo_sapiens 0 963
ENST00000532701 FAR1-006 protein_coding Homo_sapiens 0 1327
ENST00000532769 FAR1-003 retained_intron Homo_sapiens 0 464

Loading