C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118169 Slc5a2-001 ENSMUSG00000030781 10090 + 7:128265676-128272430 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSMUST00000118169
Transcript ID Kidney
ENSMUST00000118169 297.410±99.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000708 CIL_000708_0002 CGP 7:128246812-128272430
CIL_00035J CIL_00035J_0002 CGP 7:128265657-128298170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006814 IEA sodium ion transport
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330498 SLC5A2-001 protein_coding Homo_sapiens 0 2036
ENST00000419665 SLC5A2-002 nonsense_mediated_decay Homo_sapiens 0 1208
ENST00000565446 SLC5A2-006 retained_intron Homo_sapiens 0 411
ENST00000568188 SLC5A2-003 retained_intron Homo_sapiens 0 298
ENST00000569576 SLC5A2-005 protein_coding Homo_sapiens 0 505

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