C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080215 Chst15-001 ENSMUSG00000030930 10090 - 7:132235780-132317228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080215
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080215 4.466±1.72 6.123±1.17 4.262±0.65 3.339±1.44 4.116±1.72 3.572±1.18 2.152±0.71 6.382±0.94 2.041±0.42 6.209±0.09 0.791±0.26 2.942±1.08 2.277±1.56 0.417±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00011W CIL_00011W_0002 CGP 7:132042816-132317228
CIL_00011M CIL_00011M_0002 CGP 7:132235780-132576398

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016021 IEA integral component of membrane
GO:0019319 ISS hexose biosynthetic process
GO:0050656 ISS 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050659 ISS N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346248 CHST15-001 protein_coding Homo_sapiens 0 1877
ENST00000435907 CHST15-201 protein_coding Homo_sapiens 0 1877
ENST00000462406 CHST15-002 processed_transcript Homo_sapiens 0 278
ENST00000476765 CHST15-003 processed_transcript Homo_sapiens 0 333

Loading