C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase medium-chain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063770 Acsm3-001 ENSMUSG00000030935 10090 + 7:119760924-119784891 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleENSMUST00000063770
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle
ENSMUST00000063770 2.431±0.69 1.657±0.61 2.104±0.54 5.308±0.00 0.467±0.16 1.773±0.38 8.714±1.29 0.799±0.00 0.174±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0006633 IDA fatty acid biosynthetic process
GO:0015645 IDA fatty acid ligase activity
GO:0046872 IEA metal ion binding
GO:0047760 IEA butyrate-CoA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289416 ACSM3-001 protein_coding Homo_sapiens 0 1953
ENST00000440284 ACSM3-002 protein_coding Homo_sapiens 0 1334
ENST00000561795 ACSM3-004 protein_coding Homo_sapiens 0 508
ENST00000562251 ACSM3-003 protein_coding Homo_sapiens 0 1284
ENST00000563914 ACSM3-009 protein_coding Homo_sapiens 0 665
ENST00000567387 ACSM3-005 processed_transcript Homo_sapiens 0 867

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