C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA segment, Chr 7, ERATO Doi 443, expressed
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030994 D7Ertd443e 10090 - 7:134266262-134385661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094002 D7Ertd443e-001 134266262-134376828 protein_coding
  ENSMUST00000106129 D7Ertd443e-002 134266275-134341986 protein_coding
  ENSMUST00000172947 D7Ertd443e-003 134266262-134364884 protein_coding
  ENSMUST00000173195 D7Ertd443e-004 134349553-134376831 protein_coding
  ENSMUST00000173754 D7Ertd443e-005 134349674-134376825 protein_coding
  ENSMUST00000174271 D7Ertd443e-006 134354303-134385661 processed_transcript
  ENSMUST00000174700 D7Ertd443e-007 134266814-134348916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000094002ENSMUST00000106129ENSMUST00000172947ENSMUST00000173195ENSMUST00000173754ENSMUST00000174700
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000094002 0.096±0.05 N/A N/A 0.062±0.00 0.264±0.09 0.760±0.01 0.629±0.20 0.013±0.01 0.052±0.01 0.999±0.53 0.163±0.08 N/A
ENSMUST00000106129 0.089±0.04 N/A 0.042±0.00 0.416±0.39 N/A N/A N/A 0.021±0.01 N/A 0.450±0.00 0.183±0.00 10.861±2.11
ENSMUST00000172947 N/A 0.695±0.29 N/A N/A 0.095±0.05 0.131±0.00 N/A N/A N/A 1.093±0.24 N/A 12.566±4.46
ENSMUST00000173195 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A 1.131±0.14 0.708±0.00 N/A
ENSMUST00000173754 N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A
ENSMUST00000174700 0.449±0.00 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VM CIL_0003VM_0002 CGP 7:133883199-134385661
CIL_00047A CIL_00047A_0003 CGP 7:134266262-135173639

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007095 IDA mitotic G2 DNA damage checkpoint
GO:0009411 IDA response to UV
GO:0010212 IDA response to ionizing radiation
GO:0015629 IEA actin cytoskeleton
GO:0030308 IDA negative regulation of cell growth
GO:0042826 IDA histone deacetylase binding
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089024 C12H10orf90 chromosome 10 open reading frame 90 protein_coding Danio_rerio
ENSG00000154493 C10orf90 chromosome 10 open reading frame 90 protein_coding Homo_sapiens

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