C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 7, ERATO Doi 443, expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172947 D7Ertd443e-003 ENSMUSG00000030994 10090 - 7:134266262-134364884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartOvaryTestisENSMUST00000172947
Transcript ID Adrenal Breast Heart Ovary Testis
ENSMUST00000172947 0.695±0.29 0.095±0.05 0.131±0.00 1.093±0.24 12.566±4.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VM CIL_0003VM_0002 CGP 7:133883199-134385661
CIL_00047A CIL_00047A_0003 CGP 7:134266262-135173639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007095 IDA mitotic G2 DNA damage checkpoint
GO:0009411 IDA response to UV
GO:0010212 IDA response to ionizing radiation
GO:0015629 IEA actin cytoskeleton
GO:0030308 IDA negative regulation of cell growth
GO:0042826 IDA histone deacetylase binding
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284694 C10orf90-201 protein_coding Homo_sapiens 0 1122
ENST00000356858 C10orf90-001 protein_coding Homo_sapiens 0 1000
ENST00000424927 C10orf90-004 protein_coding Homo_sapiens 0 568
ENST00000432642 C10orf90-003 protein_coding Homo_sapiens 0 974
ENST00000480379 C10orf90-005 protein_coding Homo_sapiens 0 568

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