C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibroblast growth factor 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031137 Fgf13 10090 - X:59062145-59568071 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033473 Fgf13-001 59062145-59134436 protein_coding
  ENSMUST00000119306 Fgf13-008 59062145-59166164 protein_coding
  ENSMUST00000119833 Fgf13-006 59062145-59568071 protein_coding
  ENSMUST00000123660 Fgf13-003 59131874-59133162 processed_transcript
  ENSMUST00000124402 Fgf13-004 59131877-59567472 protein_coding
  ENSMUST00000131319 Fgf13-007 59250808-59568071 protein_coding
  ENSMUST00000138503 Fgf13-002 59063490-59133214 processed_transcript
  ENSMUST00000145767 Fgf13-005 59250885-59567821 protein_coding
  ENSMUST00000150413 Fgf13-009 59566814-59568048 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033473ENSMUST00000119306ENSMUST00000119833ENSMUST00000123660ENSMUST00000124402ENSMUST00000131319ENSMUST00000138503ENSMUST00000145767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033473 5.978±4.79 0.174±0.07 0.639±0.15 3.319±0.48 4.458±1.19 0.200±0.04 N/A 0.088±0.02 0.491±0.26 0.093±0.02 N/A 0.688±0.38 0.060±0.02 0.259±0.08
ENSMUST00000119306 N/A 0.131±0.00 0.098±0.00 5.558±1.18 1.462±0.00 N/A N/A 0.058±0.00 0.164±0.19 0.054±0.00 N/A 0.881±0.15 0.017±0.00 N/A
ENSMUST00000119833 N/A N/A N/A 11.286±1.10 N/A 0.349±0.18 5.219±0.00 0.069±0.00 N/A N/A 1.922±0.20 0.705±0.00 0.016±0.00 0.187±0.00
ENSMUST00000123660 N/A N/A N/A N/A N/A 678.731±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124402 N/A 0.202±0.00 N/A N/A N/A 0.230±0.07 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131319 N/A N/A N/A N/A N/A 0.658±0.19 N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000138503 12.310±2.47 0.234±0.00 N/A 44.374±0.00 5.449±2.20 0.492±0.23 7.886±0.00 0.307±0.24 N/A 0.326±0.10 N/A 1.168±0.35 0.059±0.01 0.399±0.05
ENSMUST00000145767 N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A 0.389±0.03 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PL CIL_0000PL_0003 CGP X:59062145-60030759

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000165 IEA MAPK cascade
GO:0001764 IMP neuron migration
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005874 IDA microtubule
GO:0005886 IDA plasma membrane
GO:0007026 IMP negative regulation of microtubule depolymerization
GO:0007612 IMP learning
GO:0007613 IMP memory
GO:0008017 IDA microtubule binding
GO:0008083 IEA growth factor activity
GO:0014704 IDA intercalated disc
GO:0017080 IMP sodium channel regulator activity
GO:0021766 IMP hippocampus development
GO:0021795 IMP cerebral cortex cell migration
GO:0030175 IDA filopodium
GO:0030295 IEA protein kinase activator activity
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0030426 IDA growth cone
GO:0043005 IDA neuron projection
GO:0044325 IPI ion channel binding
GO:0045200 IMP establishment of neuroblast polarity
GO:0045860 IEA positive regulation of protein kinase activity
GO:0046785 IMP microtubule polymerization
GO:0048487 IDA beta-tubulin binding
GO:0048671 IMP negative regulation of collateral sprouting
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035056 fgf13a fibroblast growth factor 13a protein_coding Danio_rerio
ENSG00000129682 FGF13 fibroblast growth factor 13 protein_coding Homo_sapiens

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