C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119306 Fgf13-008 ENSMUSG00000031137 10090 - X:59062145-59166164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLiverLungOvaryPlacentaENSMUST00000119306
Transcript ID Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Placenta
ENSMUST00000119306 0.131±0.00 0.098±0.00 5.558±1.18 1.462±0.00 0.058±0.00 0.164±0.19 0.054±0.00 0.881±0.15 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PL CIL_0000PL_0003 CGP X:59062145-60030759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0005576 IEA extracellular region
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005874 IDA microtubule
GO:0005886 IDA plasma membrane
GO:0007026 IMP negative regulation of microtubule depolymerization
GO:0007612 IMP learning
GO:0007613 IMP memory
GO:0008017 IDA microtubule binding
GO:0008083 IEA growth factor activity
GO:0014704 IDA intercalated disc
GO:0017080 IMP sodium channel regulator activity
GO:0021766 IMP hippocampus development
GO:0021795 IMP cerebral cortex cell migration
GO:0030175 IDA filopodium
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0030426 IDA growth cone
GO:0043005 IDA neuron projection
GO:0044325 IPI ion channel binding
GO:0045200 IMP establishment of neuroblast polarity
GO:0046785 IMP microtubule polymerization
GO:0048487 IDA beta-tubulin binding
GO:0048671 IMP negative regulation of collateral sprouting
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010982 fgf13a-201 protein_coding Danio_rerio 0 427
ENSDART00000052949 fgf13a-002 protein_coding Danio_rerio 0 425
ENSDART00000017259 fgf13a-001 protein_coding Danio_rerio 0 425
ENST00000305414 FGF13-002 protein_coding Homo_sapiens 0 1700
ENST00000315930 FGF13-001 protein_coding Homo_sapiens 0 1546
ENST00000436198 FGF13-003 protein_coding Homo_sapiens 0 723
ENST00000441825 FGF13-201 protein_coding Homo_sapiens 0 1544
ENST00000448673 FGF13-004 protein_coding Homo_sapiens 2e-28 130
ENST00000455663 FGF13-005 protein_coding Homo_sapiens 0 627

Loading