C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033473 Fgf13-001 ENSMUSG00000031137 10090 - X:59062145-59134436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000033473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000033473 5.978±4.79 0.174±0.07 0.639±0.15 3.319±0.48 4.458±1.19 0.200±0.04 0.088±0.02 0.491±0.26 0.093±0.02 0.688±0.38 0.060±0.02 0.259±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PL CIL_0000PL_0003 CGP X:59062145-60030759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000165 IEA MAPK cascade
GO:0001764 IMP neuron migration
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005874 IDA microtubule
GO:0005886 IDA plasma membrane
GO:0007026 IMP negative regulation of microtubule depolymerization
GO:0007612 IMP learning
GO:0007613 IMP memory
GO:0008017 IDA microtubule binding
GO:0008083 IEA growth factor activity
GO:0014704 IDA intercalated disc
GO:0017080 IMP sodium channel regulator activity
GO:0021766 IMP hippocampus development
GO:0021795 IMP cerebral cortex cell migration
GO:0030175 IDA filopodium
GO:0030295 IEA protein kinase activator activity
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0030426 IDA growth cone
GO:0043005 IDA neuron projection
GO:0044325 IPI ion channel binding
GO:0045200 IMP establishment of neuroblast polarity
GO:0045860 IEA positive regulation of protein kinase activity
GO:0046785 IMP microtubule polymerization
GO:0048487 IDA beta-tubulin binding
GO:0048671 IMP negative regulation of collateral sprouting
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017259 fgf13a-001 protein_coding Danio_rerio 0 477
ENSDART00000010982 fgf13a-201 protein_coding Danio_rerio 0 427
ENSDART00000052949 fgf13a-002 protein_coding Danio_rerio 0 425
ENST00000305414 FGF13-002 protein_coding Homo_sapiens 0 1546
ENST00000315930 FGF13-001 protein_coding Homo_sapiens 0 2119
ENST00000436198 FGF13-003 protein_coding Homo_sapiens 0 723
ENST00000441825 FGF13-201 protein_coding Homo_sapiens 0 1544
ENST00000448673 FGF13-004 protein_coding Homo_sapiens 2e-28 130
ENST00000455663 FGF13-005 protein_coding Homo_sapiens 0 627

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