C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 38, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031170 Slc38a5 10090 + X:8271133-8280179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033512 Slc38a5-001 8271381-8280179 protein_coding
  ENSMUST00000115590 Slc38a5-003 8271642-8280174 protein_coding
  ENSMUST00000115591 Slc38a5-002 8271151-8280179 protein_coding
  ENSMUST00000127103 Slc38a5-004 8271133-8272933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033512ENSMUST00000115590ENSMUST00000115591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033512 2.267±1.63 0.061±0.00 1.049±0.17 6.606±4.26 0.032±0.02 1.315±0.23 0.170±0.05 0.005±0.00 31.511±20.87 26.309±13.47 0.104±0.00 28.693±18.14 1.575±0.82 8.827±5.99
ENSMUST00000115590 N/A N/A 0.136±0.00 N/A 0.032±0.00 N/A 0.104±0.00 N/A N/A N/A N/A 13.199±3.21 0.328±0.13 0.069±0.00
ENSMUST00000115591 0.245±0.00 0.064±0.03 N/A N/A 0.056±0.01 0.491±0.23 0.243±0.14 0.020±0.01 0.112±0.04 15.894±0.00 N/A 54.189±17.42 0.076±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005886 IEA plasma membrane
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015175 IEA neutral amino acid transmembrane transporter activity
GO:0015187 IEA glycine transmembrane transporter activity
GO:0015804 IEA neutral amino acid transport
GO:0015816 IEA glycine transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009901 slc38a5a solute carrier family 38, member 5a protein_coding Danio_rerio
ENSDARG00000014587 slc38a5b solute carrier family 38, member 5b protein_coding Danio_rerio
ENSG00000017483 SLC38A5 solute carrier family 38, member 5 protein_coding Homo_sapiens

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