C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polysaccharide biosynthesis domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031226 Pbdc1 10090 + X:105079756-105117090 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033577 Pbdc1-001 105079756-105085186 protein_coding
  ENSMUST00000119477 Pbdc1-003 105079761-105117090 protein_coding
  ENSMUST00000125343 Pbdc1-002 105079775-105083160 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033577ENSMUST00000119477
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033577 1.234±0.69 1.133±0.30 2.497±0.65 2.653±0.43 0.921±0.32 1.037±0.36 0.559±0.06 0.911±0.24 3.630±3.43 1.241±0.19 1.063±0.17 2.237±1.72 5.754±2.48 1.419±1.56
ENSMUST00000119477 5.768±4.88 5.891±1.77 2.781±0.71 2.161±0.99 3.640±1.90 7.480±1.09 1.982±0.49 5.266±2.53 2.610±2.20 4.735±1.91 1.009±0.19 8.417±4.54 4.645±1.50 2.377±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OH CIL_0006OH_0002 CGP X:104854952-105117090
CIL_0001YK CIL_0001YK_0002 CGP X:105079756-105123927

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057299 pbdc1 polysaccharide biosynthesis domain containing 1 protein_coding Danio_rerio
ENSG00000102390 PBDC1 polysaccharide biosynthesis domain containing 1 protein_coding Homo_sapiens

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