C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102390-ENSG00000198934 CGP 9606 X:76172936-76431353
GeneTranscriptPositionBiotype
ENSG00000102390 (PBDC1)
polysaccharide biosynthesis domain containing 1 		ENST00000373357 (PBDC1-002) 76173040-76178196 protein_coding
ENST00000373358 (PBDC1-001) 76172936-76178204 protein_coding
ENSG00000198934 (MAGEE1)
melanoma antigen family E, 1 		ENST00000361470 (MAGEE1-001) 76427724-76431353 protein_coding
ENSG00000213684 (LDHBP2)
lactate dehydrogenase B pseudogene 2 		ENST00000456969 (LDHBP2-001) 76334841-76335845 processed_pseudogene
ENSG00000274398 (RP11-322A17.3)
 ENST00000611524 (RP11-322A17.3-001) 76250183-76251796 processed_pseudogene
CIL_0001YK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031226-ENSMUSG00000031227 CGP 10090 X:105079756-105123927
GeneTranscriptPositionBiotype
ENSMUSG00000031226 (Pbdc1)
polysaccharide biosynthesis domain containing 1 		ENSMUST00000033577 (Pbdc1-001) 105079756-105085186 protein_coding
ENSMUST00000119477 (Pbdc1-003) 105079761-105117090 protein_coding
ENSMUST00000125343 (Pbdc1-002) 105079775-105083160 retained_intron
ENSMUSG00000031227 (Magee1)
melanoma antigen, family E, 1 		ENSMUST00000033578 (Magee1-001) 105120378-105123927 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YK_0001ENSG00000102390ENST00000373357ENST00000373358ENSG00000198934ENST00000361470ENSG00000213684ENST00000456969ENSG00000274398ENST00000611524CIL_0001YK_0002ENSMUSG00000031226ENSMUST00000033577ENSMUST00000119477ENSMUST00000125343ENSMUSG00000031227ENSMUST00000033578
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YK_0001ENSG00000102390ENST00000373357ENST00000373358ENSG00000198934ENST00000361470ENSG00000213684ENST00000456969ENSG00000274398ENST00000611524CIL_0001YK_0002ENSMUSG00000031226ENSMUST00000033577ENSMUST00000119477ENSMUSG00000031227ENSMUST00000033578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102390 ENST00000373357 9.968±0.00 7.588±0.00 N/A 3.809±0.00 4.456±4.23 7.170±0.00 0.729±0.00 N/A 1.626±0.00 1.223±0.54 0.027±0.00 4.539±0.00 N/A 6.901±0.00
ENST00000373358 3.367±0.00 11.711±0.00 1.664±0.00 2.004±1.53 3.172±2.65 4.212±3.19 2.227±1.93 6.473±5.53 3.396±2.52 4.771±0.00 4.999±0.00 12.737±8.16 11.161±2.47 6.167±1.38
ENSG00000198934 ENST00000361470 1.115±0.00 1.992±0.00 0.220±0.00 17.214±9.83 0.787±0.31 0.956±0.43 0.531±0.20 1.440±0.00 0.450±0.39 0.552±0.28 0.356±0.00 1.402±1.37 0.085±0.02 0.853±0.66
ENSG00000213684 ENST00000456969 0.034±0.00 0.034±0.00 N/A 0.092±0.00 0.066±0.00 0.021±0.00 0.062±0.00 0.067±0.00 N/A 0.020±0.00 0.010±0.00 0.010±0.00 N/A 0.021±0.00
ENSG00000274398 ENST00000611524 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031226 ENSMUST00000033577 1.234±0.69 1.133±0.30 2.497±0.65 2.653±0.43 0.921±0.32 1.037±0.36 0.559±0.06 0.911±0.24 3.630±3.43 1.241±0.19 1.063±0.17 2.237±1.72 5.754±2.48 1.419±1.56
ENSMUST00000119477 5.768±4.88 5.891±1.77 2.781±0.71 2.161±0.99 3.640±1.90 7.480±1.09 1.982±0.49 5.266±2.53 2.610±2.20 4.735±1.91 1.009±0.19 8.417±4.54 4.645±1.50 2.377±1.00
ENSMUST00000125343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031227 ENSMUST00000033578 5.757±1.59 10.743±1.64 4.877±0.17 42.731±6.17 5.900±2.41 3.606±0.30 1.591±0.20 2.170±0.43 1.045±0.15 4.689±0.53 0.392±0.05 7.987±2.66 1.336±0.34 1.249±0.61

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