C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055738 Tsc22d3-001 ENSMUSG00000031431 10090 - X:140539528-140543187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055738 66.019±33.87 64.044±10.53 43.110±9.17 5.777±2.76 53.698±13.56 54.756±7.27 51.319±20.33 27.419±0.86 36.568±34.36 185.717±99.89 73.113±31.67 36.083±14.72 10.141±2.58 3.171±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JE CIL_0006JE_0002 CGP X:140456613-140600659

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006970 IDA response to osmotic stress
GO:0043426 IPI MRF binding
GO:0048642 IDA negative regulation of skeletal muscle tissue development
GO:0070236 IDA negative regulation of activation-induced cell death of T cells

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054115 tsc22d3-001 protein_coding Danio_rerio 0 244
ENST00000315660 TSC22D3-008 protein_coding Homo_sapiens 0 1609
ENST00000372382 TSC22D3-003 protein_coding Homo_sapiens 0 968
ENST00000372383 TSC22D3-004 protein_coding Homo_sapiens 0 1609
ENST00000372384 TSC22D3-005 protein_coding Homo_sapiens 0 1609
ENST00000372390 TSC22D3-002 protein_coding Homo_sapiens 0 1604
ENST00000372397 TSC22D3-001 protein_coding Homo_sapiens 0 1814
ENST00000503515 TSC22D3-017 protein_coding Homo_sapiens 0 289
ENST00000506081 TSC22D3-007 protein_coding Homo_sapiens 0 516
ENST00000514426 TSC22D3-016 protein_coding Homo_sapiens 0 363

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