C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ER lipid raft associated 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031483 Erlin2 10090 + 8:27023799-27039433 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033873 Erlin2-201 27023799-27039433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033873 18.643±3.74 13.339±1.43 18.661±1.34 16.658±8.02 13.061±2.13 26.692±4.00 6.901±0.98 38.709±3.08 9.583±1.25 16.931±1.73 1.697±0.52 17.795±2.77 32.230±13.97 10.210±2.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0002 VISTA 8:26613996-27214881
CIL_0009C5 CIL_0009C5_0002 VISTA 8:26806327-27408431
CIL_0007QT CIL_0007QT_0002 VISTA 8:26806345-27408424
CIL_0002IU CIL_0002IU_0002 CGP 8:26977336-27039433
CIL_0002IV CIL_0002IV_0002 CGP 8:27023799-27056131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005789 ISS endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0030433 IEA ER-associated ubiquitin-dependent protein catabolic process
GO:0043234 ISO protein complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086523 ERLIN2 ER lipid raft associated 2 (erlin2), mRNA protein_coding Danio_rerio
ENSDARG00000095968 erlin2 ER lipid raft associated 2 protein_coding Danio_rerio
ENSG00000147475 ERLIN2 ER lipid raft associated 2 protein_coding Homo_sapiens

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