C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor II E, polypeptide 2 (beta subunit)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031585 Gtf2e2 10090 + 8:33731833-33777173 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000167264 Gtf2e2-002 33732042-33777164 protein_coding
  ENSMUST00000170705 Gtf2e2-001 33731833-33777164 protein_coding
  ENSMUST00000171010 Gtf2e2-201 33732339-33777173 protein_coding
  ENSMUST00000186200 Gtf2e2-006 33765002-33776778 processed_transcript
  ENSMUST00000187392 Gtf2e2-004 33732133-33752459 protein_coding
  ENSMUST00000190639 Gtf2e2-005 33733443-33758567 protein_coding
  ENSMUST00000190675 Gtf2e2-003 33732311-33735828 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167264ENSMUST00000170705ENSMUST00000171010ENSMUST00000186200ENSMUST00000187392ENSMUST00000190639ENSMUST00000190675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167264 0.117±0.00 0.544±0.02 2.459±0.00 3.716±1.89 0.337±0.07 0.245±0.08 0.215±0.00 0.188±0.04 3.282±3.30 0.376±0.15 1.866±0.63 35.752±12.26 24.955±18.97 N/A
ENSMUST00000170705 0.342±0.17 0.255±0.15 0.924±0.00 0.830±0.26 0.310±0.08 0.437±0.22 0.495±0.08 0.415±0.18 0.794±0.62 0.356±0.08 1.561±0.86 0.817±0.25 2.769±1.00 4.550±0.35
ENSMUST00000171010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A N/A
ENSMUST00000186200 2.286±0.82 2.210±0.93 3.436±0.00 4.457±2.00 1.958±1.21 1.830±0.90 1.649±0.65 1.528±0.75 1.284±0.74 1.310±0.27 3.138±0.14 11.367±14.53 20.657±2.82 13.840±1.95
ENSMUST00000187392 1.474±0.02 0.532±0.32 N/A N/A 0.319±0.07 0.588±0.22 0.369±0.00 0.376±0.16 0.341±0.10 0.402±0.15 N/A 2.136±0.56 N/A 7.413±1.77
ENSMUST00000190639 N/A N/A N/A N/A N/A N/A 0.699±0.00 0.412±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000190675 N/A N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A N/A 1.833±0.11 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IH CIL_0008IH_0002 VISTA 8:33603821-34207069
CIL_0004EE CIL_0004EE_0002 CGP 8:33731833-33777173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005673 IEA transcription factor TFIIE complex
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012672 gtf2e2 general transcription factor IIE, polypeptide 2, beta protein_coding Danio_rerio
ENSG00000197265 GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa protein_coding Homo_sapiens

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