C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIE, polypeptide 2, beta 34kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197265 GTF2E2 9606 - 8:30578318-30658251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355904 GTF2E2-001 30578318-30658251 protein_coding
  ENST00000518445 GTF2E2-002 30612470-30657618 protein_coding
  ENST00000518599 GTF2E2-003 30607104-30657005 protein_coding
  ENST00000522833 GTF2E2-005 30584503-30612365 processed_transcript
  ENST00000523499 GTF2E2-004 30607057-30658032 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355904ENST00000518445ENST00000518599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355904 1.614±0.00 1.768±0.00 0.865±0.00 3.500±0.67 4.101±1.27 3.220±1.19 0.981±0.46 2.265±0.66 2.302±0.14 4.020±0.90 0.724±0.04 6.344±5.32 3.783±1.00 8.923±0.00
ENST00000518445 N/A N/A 3.594±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 47.217±0.00 43.900±0.00 89.900±0.00
ENST00000518599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.062±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393
CIL_0008IH CIL_0008IH_0001 VISTA 8:30111104-30714589
CIL_0004EE CIL_0004EE_0001 CGP 8:30578318-30658251

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005673 IEA transcription factor TFIIE complex
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 IEA:TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012672 gtf2e2 general transcription factor IIE, polypeptide 2, beta protein_coding Danio_rerio
ENSMUSG00000031585 Gtf2e2 general transcription factor II E, polypeptide 2 (beta subunit) protein_coding Mus_musculus

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