C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004EE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197265-ENSG00000197265 CGP 9606 8:30578318-30658251
GeneTranscriptPositionBiotype
ENSG00000197265 (GTF2E2)
general transcription factor IIE, polypeptide 2, beta 34kDa 		ENST00000355904 (GTF2E2-001) 30578318-30658251 protein_coding
ENST00000518445 (GTF2E2-002) 30612470-30657618 protein_coding
ENST00000518599 (GTF2E2-003) 30607104-30657005 protein_coding
ENST00000522833 (GTF2E2-005) 30584503-30612365 processed_transcript
ENST00000523499 (GTF2E2-004) 30607057-30658032 nonsense_mediated_decay
ENSG00000253112 (CTD-2373N4.5)
 ENST00000522640 (CTD-2373N4.5-001) 30596914-30597532 antisense
ENSG00000253457 (SMIM18)
small integral membrane protein 18 		ENST00000517349 (SMIM18-001) 30638600-30646064 protein_coding
ENSG00000254172 (U5)
U5 spliceosomal RNA 		ENST00000522581 (U5.1-201) 30643689-30643802 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004EE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031585-ENSMUSG00000031585 CGP 10090 8:33731833-33777173
GeneTranscriptPositionBiotype
ENSMUSG00000031585 (Gtf2e2)
general transcription factor II E, polypeptide 2 (beta subunit) 		ENSMUST00000167264 (Gtf2e2-002) 33732042-33777164 protein_coding
ENSMUST00000170705 (Gtf2e2-001) 33731833-33777164 protein_coding
ENSMUST00000171010 (Gtf2e2-201) 33732339-33777173 protein_coding
ENSMUST00000186200 (Gtf2e2-006) 33765002-33776778 processed_transcript
ENSMUST00000187392 (Gtf2e2-004) 33732133-33752459 protein_coding
ENSMUST00000190639 (Gtf2e2-005) 33733443-33758567 protein_coding
ENSMUST00000190675 (Gtf2e2-003) 33732311-33735828 protein_coding
ENSMUSG00000094500 (Smim18)
small integral membrane protein 18 		ENSMUST00000179364 (Smim18-001) 33742112-33747770 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EE_0001ENSG00000197265ENST00000355904ENST00000518445ENST00000518599ENST00000522833ENST00000523499ENSG00000253112ENST00000522640ENSG00000253457ENST00000517349ENSG00000254172ENST00000522581CIL_0004EE_0002ENSMUSG00000031585ENSMUST00000167264ENSMUST00000170705ENSMUST00000171010ENSMUST00000186200ENSMUST00000187392ENSMUST00000190639ENSMUST00000190675ENSMUSG00000094500ENSMUST00000179364
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EE_0001ENSG00000197265ENST00000355904ENST00000518445ENST00000518599ENSG00000253112ENST00000522640ENSG00000253457ENST00000517349ENSG00000254172ENST00000522581CIL_0004EE_0002ENSMUSG00000031585ENSMUST00000167264ENSMUST00000170705ENSMUST00000171010ENSMUST00000186200ENSMUST00000187392ENSMUST00000190639ENSMUST00000190675ENSMUSG00000094500ENSMUST00000179364
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197265 ENST00000355904 1.614±0.00 1.768±0.00 0.865±0.00 3.500±0.67 4.101±1.27 3.220±1.19 0.981±0.46 2.265±0.66 2.302±0.14 4.020±0.90 0.724±0.04 6.344±5.32 3.783±1.00 8.923±0.00
ENST00000518445 N/A N/A 3.594±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 47.217±0.00 43.900±0.00 89.900±0.00
ENST00000518599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.062±0.00 N/A N/A
ENST00000522833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253112 ENST00000522640 0.126±0.00 N/A N/A 0.239±0.00 0.044±0.00 0.160±0.00 0.154±0.00 0.213±0.00 N/A N/A N/A 0.242±0.00 N/A 0.713±0.00
ENSG00000253457 ENST00000517349 0.021±0.00 0.094±0.00 0.161±0.00 0.488±0.43 0.106±0.00 N/A N/A 0.154±0.07 0.009±0.00 N/A N/A 0.145±0.13 N/A 0.018±0.00
ENSG00000254172 ENST00000522581 N/A 0.290±0.00 N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031585 ENSMUST00000167264 0.117±0.00 0.544±0.02 2.459±0.00 3.716±1.89 0.337±0.07 0.245±0.08 0.215±0.00 0.188±0.04 3.282±3.30 0.376±0.15 1.866±0.63 35.752±12.26 24.955±18.97 N/A
ENSMUST00000170705 0.342±0.17 0.255±0.15 0.924±0.00 0.830±0.26 0.310±0.08 0.437±0.22 0.495±0.08 0.415±0.18 0.794±0.62 0.356±0.08 1.561±0.86 0.817±0.25 2.769±1.00 4.550±0.35
ENSMUST00000171010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A N/A
ENSMUST00000186200 2.286±0.82 2.210±0.93 3.436±0.00 4.457±2.00 1.958±1.21 1.830±0.90 1.649±0.65 1.528±0.75 1.284±0.74 1.310±0.27 3.138±0.14 11.367±14.53 20.657±2.82 13.840±1.95
ENSMUST00000187392 1.474±0.02 0.532±0.32 N/A N/A 0.319±0.07 0.588±0.22 0.369±0.00 0.376±0.16 0.341±0.10 0.402±0.15 N/A 2.136±0.56 N/A 7.413±1.77
ENSMUST00000190639 N/A N/A N/A N/A N/A N/A 0.699±0.00 0.412±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000190675 N/A N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A N/A 1.833±0.11 N/A N/A
ENSMUSG00000094500 ENSMUST00000179364 0.101±0.03 N/A 0.139±0.00 15.534±9.99 0.265±0.11 0.328±0.17 N/A 0.076±0.00 0.339±0.19 0.096±0.00 N/A 0.233±0.10 0.213±0.10 0.276±0.05

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