C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bromodomain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031660 Brd7 10090 - 8:88331039-88362194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034085 Brd7-001 88331059-88362194 protein_coding
  ENSMUST00000131748 Brd7-007 88331039-88332919 processed_transcript
  ENSMUST00000135471 Brd7-003 88357532-88362014 processed_transcript
  ENSMUST00000139675 Brd7-002 88332806-88335487 retained_intron
  ENSMUST00000145609 Brd7-005 88333549-88342756 processed_transcript
  ENSMUST00000146370 Brd7-004 88332787-88333921 processed_transcript
  ENSMUST00000149841 Brd7-006 88332886-88342834 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034085ENSMUST00000145609ENSMUST00000149841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034085 1.800±0.37 1.774±0.26 6.066±0.58 9.300±4.81 1.461±0.48 1.482±0.68 1.769±0.18 1.708±0.23 4.950±5.29 4.357±1.28 4.925±0.81 3.370±2.49 7.265±3.96 2.514±0.25
ENSMUST00000145609 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.443±0.00 N/A N/A N/A N/A
ENSMUST00000149841 7.541±1.41 N/A N/A N/A 7.075±2.54 4.549±0.50 7.315±1.01 6.962±0.97 4.810±0.83 6.772±0.08 N/A 11.989±2.08 N/A 7.421±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000787 CIL_000787_0002 CGP 8:88272403-88362194
CIL_0003PU CIL_0003PU_0002 CGP 8:88331039-88594887

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002039 ISS p53 binding
GO:0003713 ISS transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IPI nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007049 IEA cell cycle
GO:0008134 ISA transcription factor binding
GO:0008285 ISS negative regulation of cell proliferation
GO:0016055 IEA Wnt signaling pathway
GO:0035066 ISS positive regulation of histone acetylation
GO:0042393 IEA histone binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0070577 ISS lysine-acetylated histone binding
GO:2000134 ISS negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008380 brd7 bromodomain containing 7 protein_coding Danio_rerio
ENSG00000166164 BRD7 bromodomain containing 7 protein_coding Homo_sapiens

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