C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003PU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166164-ENSG00000140807 CGP 9606 16:50313487-50640739
GeneTranscriptPositionBiotype
ENSG00000121281 (ADCY7)
adenylate cyclase 7
ENST00000254235 (ADCY7-201) 50287912-50318132 protein_coding
ENST00000394697 (ADCY7-001) 50266516-50318135 protein_coding
ENST00000537579 (ADCY7-202) 50287911-50310515 protein_coding
ENST00000562623 (ADCY7-005) 50266541-50288104 processed_transcript
ENST00000563677 (ADCY7-008) 50274131-50298981 processed_transcript
ENST00000564044 (ADCY7-013) 50246148-50299011 processed_transcript
ENST00000564965 (ADCY7-014) 50246137-50290528 protein_coding
ENST00000566433 (ADCY7-002) 50266551-50310523 protein_coding
ENST00000566761 (ADCY7-009) 50274153-50290518 protein_coding
ENST00000567277 (ADCY7-004) 50288077-50310529 nonsense_mediated_decay
ENST00000568731 (ADCY7-012) 50300820-50301964 processed_transcript
ENST00000568930 (ADCY7-011) 50313104-50315738 retained_intron
ENST00000568933 (ADCY7-007) 50266564-50287934 processed_transcript
ENST00000569265 (ADCY7-006) 50279527-50288230 protein_coding
ENST00000570187 (ADCY7-010) 50304394-50309198 retained_intron
ENSG00000140807 (NKD1)
naked cuticle homolog 1 (Drosophila)
ENST00000268459 (NKD1-001) 50548330-50640739 protein_coding
ENST00000564336 (NKD1-002) 50548396-50616108 processed_transcript
ENST00000566396 (NKD1-003) 50625225-50633222 retained_intron
ENSG00000166164 (BRD7)
bromodomain containing 7
ENST00000394688 (BRD7-001) 50315957-50368934 protein_coding
ENST00000394689 (BRD7-002) 50319030-50368779 protein_coding
ENST00000401491 (BRD7-003) 50349023-50368920 processed_transcript
ENST00000475877 (BRD7-004) 50334711-50361833 processed_transcript
ENST00000562383 (BRD7-009) 50313487-50319929 protein_coding
ENST00000567826 (BRD7-006) 50350017-50368920 retained_intron
ENST00000569774 (BRD7-008) 50315947-50320377 protein_coding
ENSG00000260029 (RP11-401P9.1)
ENST00000569940 (RP11-401P9.1-001) 50551824-50553940 antisense
ENSG00000260573 (RP11-21B23.3)
ENST00000567899 (RP11-21B23.3-001) 50407701-50408513 lincRNA
ENSG00000261092 (RP11-21B23.2)
ENST00000566876 (RP11-21B23.2-001) 50390916-50395133 lincRNA
ENSG00000278909 (RP11-401P9.7)
ENST00000623140 (RP11-401P9.7-001) 50555355-50558719 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0003PU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031660-ENSMUSG00000031661 CGP 10090 8:88331039-88594887
GeneTranscriptPositionBiotype
ENSMUSG00000031660 (Brd7)
bromodomain containing 7
ENSMUST00000034085 (Brd7-001) 88331059-88362194 protein_coding
ENSMUST00000131748 (Brd7-007) 88331039-88332919 processed_transcript
ENSMUST00000135471 (Brd7-003) 88357532-88362014 processed_transcript
ENSMUST00000139675 (Brd7-002) 88332806-88335487 retained_intron
ENSMUST00000145609 (Brd7-005) 88333549-88342756 processed_transcript
ENSMUST00000146370 (Brd7-004) 88332787-88333921 processed_transcript
ENSMUST00000149841 (Brd7-006) 88332886-88342834 processed_transcript
ENSMUSG00000031661 (Nkd1)
naked cuticle 1 homolog (Drosophila)
ENSMUST00000034086 (Nkd1-201) 88521344-88594887 protein_coding
ENSMUST00000169179 (Nkd1-202) 88527633-88594887 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PU_0001ENSG00000121281ENST00000254235ENST00000394697ENST00000537579ENST00000562623ENST00000563677ENST00000564044ENST00000564965ENST00000566433ENST00000566761ENST00000567277ENST00000568731ENST00000568930ENST00000568933ENST00000569265ENST00000570187ENSG00000140807ENST00000268459ENST00000564336ENST00000566396ENSG00000166164ENST00000394688ENST00000394689ENST00000401491ENST00000475877ENST00000562383ENST00000567826ENST00000569774ENSG00000260029ENST00000569940ENSG00000260573ENST00000567899ENSG00000261092ENST00000566876ENSG00000278909ENST00000623140CIL_0003PU_0002ENSMUSG00000031660ENSMUST00000034085ENSMUST00000131748ENSMUST00000135471ENSMUST00000139675ENSMUST00000145609ENSMUST00000146370ENSMUST00000149841ENSMUSG00000031661ENSMUST00000034086ENSMUST00000169179
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PU_0001ENSG00000121281ENST00000254235ENSG00000140807ENST00000268459ENST00000564336ENST00000566396ENSG00000166164ENST00000394688ENST00000394689ENST00000569774ENSG00000260029ENST00000569940ENSG00000260573ENST00000567899ENSG00000261092ENST00000566876ENSG00000278909ENST00000623140CIL_0003PU_0002ENSMUSG00000031660ENSMUST00000034085ENSMUST00000145609ENSMUST00000149841ENSMUSG00000031661ENSMUST00000034086ENSMUST00000169179
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121281 ENST00000254235 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.735±0.00 N/A N/A N/A N/A
ENST00000394697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140807 ENST00000268459 0.373±0.00 1.003±0.00 N/A 0.637±0.38 0.410±0.25 1.128±0.00 0.058±0.00 0.629±0.52 0.505±0.32 1.288±0.36 0.062±0.00 1.234±0.30 1.588±0.39 1.810±0.14
ENST00000564336 N/A N/A N/A N/A N/A N/A N/A 2.382±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566396 N/A N/A N/A N/A N/A N/A N/A 0.649±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000166164 ENST00000394688 2.216±0.00 2.515±0.00 0.836±0.00 1.796±0.22 3.703±0.94 2.642±0.08 1.482±0.65 1.964±0.79 1.884±0.91 4.650±0.02 1.145±0.49 3.746±1.27 8.774±3.67 5.638±1.03
ENST00000394689 6.574±0.00 4.805±0.00 1.681±0.00 4.956±1.45 5.023±1.55 6.729±4.41 3.252±1.81 5.596±4.01 3.656±0.04 4.562±2.14 4.633±3.71 8.991±3.42 15.839±2.55 21.376±0.78
ENST00000401491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.534±0.00 N/A 71.211±0.00
ENSG00000260029 ENST00000569940 N/A 0.085±0.00 N/A 0.040±0.02 0.195±0.00 N/A N/A N/A 0.046±0.00 0.250±0.00 N/A 0.157±0.07 N/A 0.041±0.00
ENSG00000260573 ENST00000567899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.351±0.19
ENSG00000261092 ENST00000566876 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A 0.430±0.48 0.523±0.11 0.082±0.01
ENSG00000278909 ENST00000623140 0.008±0.00 0.110±0.00 0.092±0.00 0.054±0.00 0.186±0.12 0.090±0.01 0.043±0.03 0.029±0.00 0.041±0.00 0.238±0.19 N/A 0.244±0.29 0.094±0.00 0.087±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031660 ENSMUST00000034085 1.800±0.37 1.774±0.26 6.066±0.58 9.300±4.81 1.461±0.48 1.482±0.68 1.769±0.18 1.708±0.23 4.950±5.29 4.357±1.28 4.925±0.81 3.370±2.49 7.265±3.96 2.514±0.25
ENSMUST00000131748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145609 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.443±0.00 N/A N/A N/A N/A
ENSMUST00000146370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149841 7.541±1.41 N/A N/A N/A 7.075±2.54 4.549±0.50 7.315±1.01 6.962±0.97 4.810±0.83 6.772±0.08 N/A 11.989±2.08 N/A 7.421±0.94
ENSMUSG00000031661 ENSMUST00000034086 11.146±2.13 14.203±0.76 18.668±1.33 4.954±1.95 3.627±1.15 8.739±0.57 0.541±0.16 2.075±0.23 1.408±0.93 29.519±11.21 0.174±0.04 9.999±4.42 1.436±0.72 0.578±0.16
ENSMUST00000169179 N/A 2.483±0.00 N/A N/A 1.661±0.00 N/A N/A N/A N/A N/A 0.147±0.00 3.223±1.65 N/A N/A

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