C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulatory factor X, 1 (influences HLA class II expression)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031706 Rfx1 10090 + 8:84066836-84096992 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005600 Rfx1-201 84066836-84096992 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005600 5.544±2.12 9.917±1.15 3.387±0.48 10.582±4.76 11.959±2.00 12.183±1.25 3.034±0.50 5.630±0.61 2.575±1.10 8.763±1.10 1.464±0.37 8.579±3.86 4.120±2.19 17.750±6.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005883 rfx1a regulatory factor X, 1a (influences HLA class II expression) protein_coding Danio_rerio
ENSDARG00000075904 rfx1b regulatory factor X, 1b (influences HLA class II expression) protein_coding Danio_rerio
ENSG00000132005 HGNC:9982 regulatory factor X, 1 (influences HLA class II expression) protein_coding Homo_sapiens

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