C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulatory factor X, 1b (influences HLA class II expression)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000075904 rfx1b 7955 - 1:54655317-54674075 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000148382 rfx1b-001 54655317-54674075 protein_coding
  ENSDART00000150357 rfx1b-002 54667566-54674075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000148382
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000148382 2.257±0.32 4.245±0.72 2.052±1.48 0.785±0.00 2.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Z CIL_00016Z_0001 CGP 1:54636220-54674075

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132005 HGNC:9982 regulatory factor X, 1 (influences HLA class II expression) protein_coding Homo_sapiens
ENSMUSG00000031706 Rfx1 regulatory factor X, 1 (influences HLA class II expression) protein_coding Mus_musculus

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