C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031709 Tbc1d9 10090 + 8:83165352-83272934 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034145 Tbc1d9-001 83165352-83272422 protein_coding
  ENSMUST00000093393 Tbc1d9-002 83165860-83272934 protein_coding
  ENSMUST00000142673 Tbc1d9-003 83259259-83270950 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034145ENSMUST00000093393ENSMUST00000142673
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034145 1.439±0.53 2.510±1.07 2.889±0.58 9.986±1.48 3.608±1.09 2.812±0.74 0.368±0.13 0.757±0.14 0.233±0.13 5.319±0.96 0.059±0.02 2.873±0.92 1.088±0.75 N/A
ENSMUST00000093393 1.468±0.42 1.618±0.65 5.016±2.73 13.059±4.21 1.515±0.37 1.391±0.51 0.550±0.10 1.053±0.16 0.304±0.24 4.334±0.54 0.149±0.05 1.677±0.56 2.072±2.29 1.882±0.17
ENSMUST00000142673 N/A N/A N/A 43.323±0.00 N/A N/A N/A N/A N/A N/A 0.297±0.20 4.774±0.00 5.813±2.53 21.784±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O7 CIL_0006O7_0002 CGP 8:83165352-83298456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059900 tbc1d9 TBC1 domain family, member 9 (with GRAM domain) protein_coding Danio_rerio
ENSG00000109436 TBC1D9 TBC1 domain family, member 9 (with GRAM domain) protein_coding Homo_sapiens

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