C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093393 Tbc1d9-002 ENSMUSG00000031709 10090 + 8:83165860-83272934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093393
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093393 1.468±0.42 1.618±0.65 5.016±2.73 13.059±4.21 1.515±0.37 1.391±0.51 0.550±0.10 1.053±0.16 0.304±0.24 4.334±0.54 0.149±0.05 1.677±0.56 2.072±2.29 1.882±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O7 CIL_0006O7_0002 CGP 8:83165352-83298456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143909 tbc1d9-001 protein_coding Danio_rerio 0 1857
ENSDART00000083799 tbc1d9-201 protein_coding Danio_rerio 0 935
ENST00000442267 TBC1D9-001 protein_coding Homo_sapiens 0 4290
ENST00000514787 TBC1D9-003 retained_intron Homo_sapiens 0 444

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