C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034145 Tbc1d9-001 ENSMUSG00000031709 10090 + 8:83165352-83272422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000034145
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000034145 1.439±0.53 2.510±1.07 2.889±0.58 9.986±1.48 3.608±1.09 2.812±0.74 0.368±0.13 0.757±0.14 0.233±0.13 5.319±0.96 0.059±0.02 2.873±0.92 1.088±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O7 CIL_0006O7_0002 CGP 8:83165352-83298456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143909 tbc1d9-001 protein_coding Danio_rerio 0 1186
ENSDART00000083799 tbc1d9-201 protein_coding Danio_rerio 0 935
ENST00000442267 TBC1D9-001 protein_coding Homo_sapiens 0 3062

Loading