C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 4C, cAMP specific
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031842 Pde4c 10090 + 8:70723720-70751186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034307 Pde4c-002 70724064-70751186 protein_coding
  ENSMUST00000110095 Pde4c-001 70724065-70751172 protein_coding
  ENSMUST00000123739 Pde4c-005 70723720-70746046 protein_coding
  ENSMUST00000128685 Pde4c-004 70747891-70750814 retained_intron
  ENSMUST00000134693 Pde4c-006 70730112-70745893 processed_transcript
  ENSMUST00000149272 Pde4c-003 70743079-70750473 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034307ENSMUST00000110095ENSMUST00000128685ENSMUST00000149272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034307 N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.030±0.00
ENSMUST00000110095 N/A 0.382±0.13 0.066±0.01 N/A 0.575±0.10 0.782±0.35 1.508±0.12 27.216±3.72 4.765±3.31 0.563±0.17 0.578±0.29 0.561±0.40 0.610±0.85 0.172±0.02
ENSMUST00000128685 0.709±0.00 0.398±0.03 N/A N/A 0.194±0.00 0.451±0.00 0.691±0.00 9.059±2.13 1.675±1.51 0.609±0.00 0.359±0.00 0.551±0.31 0.465±0.57 0.082±0.05
ENSMUST00000149272 N/A 0.296±0.02 N/A 0.363±0.00 0.526±0.00 0.496±0.12 1.041±0.67 N/A 0.682±0.00 0.347±0.05 0.456±0.12 0.374±0.13 0.045±0.02 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BA CIL_0006BA_0002 CGP 8:70723720-70758677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005615 IEA extracellular space
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0046872 IEA metal ion binding
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002411 pde4cb phosphodiesterase 4C, cAMP-specific b protein_coding Danio_rerio
ENSDARG00000013221 pde4ca phosphodiesterase 4C, cAMP-specific a protein_coding Danio_rerio
ENSG00000105650 PDE4C phosphodiesterase 4C, cAMP-specific protein_coding Homo_sapiens

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