C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 4C, cAMP specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149272 Pde4c-003 ENSMUSG00000031842 10090 + 8:70743079-70750473 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000149272
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149272 0.296±0.02 0.363±0.00 0.526±0.00 0.496±0.12 1.041±0.67 0.682±0.00 0.347±0.05 0.456±0.12 0.374±0.13 0.045±0.02 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BA CIL_0006BA_0002 CGP 8:70723720-70758677

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018934 pde4d-201 protein_coding Danio_rerio 2e-20 106
ENSDART00000139452 pde4d-001 protein_coding Danio_rerio 2e-20 106
ENST00000262805 PDE4C-004 protein_coding Homo_sapiens 0 412
ENST00000355502 PDE4C-001 protein_coding Homo_sapiens 2e-32 147
ENST00000447275 PDE4C-005 protein_coding Homo_sapiens 7e-33 147
ENST00000539010 PDE4C-201 protein_coding Homo_sapiens 5e-33 147
ENST00000594465 PDE4C-003 protein_coding Homo_sapiens 9e-33 147
ENST00000594617 PDE4C-002 protein_coding Homo_sapiens 1e-32 147
ENST00000597297 PDE4C-007 protein_coding Homo_sapiens 4e-33 147
ENST00000597360 PDE4C-006 retained_intron Homo_sapiens 1e-32 147
ENST00000598111 PDE4C-008 protein_coding Homo_sapiens 4e-33 147
ENST00000599188 PDE4C-009 nonsense_mediated_decay Homo_sapiens 0 361

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