C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032097 Ddx6 10090 + 9:44604892-44640731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000170489 Ddx6-201 44604892-44640731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170489 11.446±9.64 17.944±2.07 6.674±2.78 9.586±5.73 17.051±4.60 18.062±1.73 5.609±3.78 6.699±5.68 7.341±2.59 19.253±6.88 2.467±0.88 24.622±8.96 9.462±5.13 5.683±2.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000932 ISO cytoplasmic mRNA processing body
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0010494 IEA cytoplasmic stress granule
GO:0016020 IEA membrane
GO:0016442 IEA RISC complex
GO:0033962 ISO cytoplasmic mRNA processing body assembly
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061338 ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein_coding Danio_rerio
ENSG00000110367 DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 protein_coding Homo_sapiens

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