C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB27A, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032202 Rab27a 10090 + 9:73044854-73097629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034722 Rab27a-003 73044857-73097592 protein_coding
  ENSMUST00000184032 Rab27a-005 73094833-73096415 retained_intron
  ENSMUST00000184146 Rab27a-001 73044854-73097629 protein_coding
  ENSMUST00000184575 Rab27a-004 73044984-73085320 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034722ENSMUST00000184032ENSMUST00000184146ENSMUST00000184575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034722 2.787±1.46 1.736±0.33 5.466±1.84 0.573±0.43 1.489±0.25 6.516±0.83 0.698±0.17 4.453±0.86 1.779±1.37 14.545±3.41 0.554±0.14 8.120±8.10 1.613±0.43 0.695±0.04
ENSMUST00000184032 N/A 2.908±0.59 N/A 0.784±0.00 1.669±0.90 4.594±0.76 0.403±0.13 1.324±0.00 0.350±0.05 5.180±0.92 N/A 4.697±1.56 1.835±0.94 5.702±1.51
ENSMUST00000184146 N/A 0.534±0.00 N/A N/A 0.456±0.00 N/A N/A N/A 0.387±0.00 N/A N/A N/A 0.257±0.00 N/A
ENSMUST00000184575 N/A 1.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005622 ISS intracellular
GO:0005764 IEA lysosome
GO:0005770 IEA late endosome
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0006184 IDA GTP catabolic process
GO:0006605 IMP protein targeting
GO:0006887 IEA exocytosis
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007596 IMP blood coagulation
GO:0010628 IEA positive regulation of gene expression
GO:0016192 IMP vesicle-mediated transport
GO:0016324 IEA apical plasma membrane
GO:0019003 ISS GDP binding
GO:0019882 IEA antigen processing and presentation
GO:0019904 IEA protein domain specific binding
GO:0030141 IMP secretory granule
GO:0030318 IMP melanocyte differentiation
GO:0030425 IEA dendrite
GO:0030667 IEA secretory granule membrane
GO:0031489 IPI myosin V binding
GO:0032400 IMP melanosome localization
GO:0032402 IMP melanosome transport
GO:0032585 IEA multivesicular body membrane
GO:0036257 IEA multivesicular body organization
GO:0042470 IDA melanosome
GO:0043316 IMP cytotoxic T cell degranulation
GO:0043320 IMP natural killer cell degranulation
GO:0043473 IMP pigmentation
GO:0045921 IEA positive regulation of exocytosis
GO:0051875 IMP pigment granule localization
GO:0051904 IMP pigment granule transport
GO:0070062 IEA extracellular vesicular exosome
GO:0070382 IEA exocytic vesicle
GO:0071985 IEA multivesicular body sorting pathway
GO:1903307 IEA positive regulation of regulated secretory pathway
GO:1903435 IEA positive regulation of constitutive secretory pathway
GO:1990182 IEA exosomal secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040532 rab27a RAB27A, member RAS oncogene family protein_coding Danio_rerio
ENSG00000069974 RAB27A RAB27A, member RAS oncogene family protein_coding Homo_sapiens

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