C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB27A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034722 Rab27a-003 ENSMUSG00000032202 10090 + 9:73044857-73097592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034722 2.787±1.46 1.736±0.33 5.466±1.84 0.573±0.43 1.489±0.25 6.516±0.83 0.698±0.17 4.453±0.86 1.779±1.37 14.545±3.41 0.554±0.14 8.120±8.10 1.613±0.43 0.695±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005622 ISS intracellular
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0006184 IDA GTP catabolic process
GO:0006605 IMP protein targeting
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007596 IMP blood coagulation
GO:0016192 IMP vesicle-mediated transport
GO:0019003 ISS GDP binding
GO:0030141 IMP secretory granule
GO:0030318 IMP melanocyte differentiation
GO:0031489 IPI myosin V binding
GO:0032400 IMP melanosome localization
GO:0032402 IMP melanosome transport
GO:0042470 IDA melanosome
GO:0043316 IMP cytotoxic T cell degranulation
GO:0043320 IMP natural killer cell degranulation
GO:0043473 IMP pigmentation
GO:0051875 IMP pigment granule localization
GO:0051904 IMP pigment granule transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336787 RAB27A-201 protein_coding Homo_sapiens 0 809
ENST00000396307 RAB27A-001 protein_coding Homo_sapiens 0 809
ENST00000563262 RAB27A-009 protein_coding Homo_sapiens 0 370
ENST00000564609 RAB27A-002 protein_coding Homo_sapiens 0 809
ENST00000565972 RAB27A-004 protein_coding Homo_sapiens 0 536
ENST00000566877 RAB27A-006 protein_coding Homo_sapiens 0 697
ENST00000567380 RAB27A-010 protein_coding Homo_sapiens 0 575
ENST00000569493 RAB27A-003 protein_coding Homo_sapiens 0 809

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