C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipid scramblase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032372 Plscr2 10090 + 9:92275602-92297752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034932 Plscr2-001 92275602-92297731 protein_coding
  ENSMUST00000113044 Plscr2-004 92289572-92297731 protein_coding
  ENSMUST00000126911 Plscr2-002 92275746-92282192 protein_coding
  ENSMUST00000156772 Plscr2-003 92290819-92291784 retained_intron
  ENSMUST00000180154 Plscr2-201 92275602-92297752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034932ENSMUST00000113044ENSMUST00000126911ENSMUST00000156772ENSMUST00000180154
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034932 2.975±0.87 7.702±2.46 1.624±0.28 0.158±0.05 3.983±1.35 1.554±0.87 3.685±1.22 126.120±15.22 6.468±6.12 15.994±1.75 0.406±0.09 4.274±1.46 1.019±1.33 0.258±0.11
ENSMUST00000113044 N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A 0.065±0.04 N/A 0.168±0.10 0.923±0.11 0.119±0.02 0.343±0.00
ENSMUST00000126911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.05
ENSMUST00000156772 N/A N/A N/A 0.241±0.06 N/A 0.829±0.00 N/A N/A 0.218±0.12 N/A 0.111±0.00 N/A 0.100±0.05 0.613±0.37
ENSMUST00000180154 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A 3.083±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0006 CGP 9:92249750-92297752
CIL_00065H CIL_00065H_0007 CGP 9:92275602-92357876

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane
GO:0017124 IEA SH3 domain binding
GO:0046872 IEA metal ion binding
GO:0071222 IEP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045470 FP245465.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000058638 si:ch211-71m22.1 si:ch211-71m22.1 protein_coding Danio_rerio
ENSDARG00000077468 si:ch73-206p6.1 si:ch73-206p6.1 protein_coding Danio_rerio
ENSDARG00000079075 si:ch211-71m22.3 si:ch211-71m22.3 protein_coding Danio_rerio
ENSDARG00000091266 si:ch211-71m22.5 si:ch211-71m22.5 protein_coding Danio_rerio
ENSG00000163746 PLSCR2 phospholipid scramblase 2 protein_coding Homo_sapiens
ENSG00000188313 PLSCR1 phospholipid scramblase 1 protein_coding Homo_sapiens

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