C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipid scramblase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163746 PLSCR2 9606 - 3:146391421-146495991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336685 PLSCR2-001 146433288-146495935 protein_coding
  ENST00000463633 PLSCR2-005 146391421-146460074 nonsense_mediated_decay
  ENST00000474418 PLSCR2-004 146494594-146495954 processed_transcript
  ENST00000489015 PLSCR2-003 146454002-146495991 protein_coding
  ENST00000497985 PLSCR2-002 146433445-146469301 protein_coding
  ENST00000610787 PLSCR2-201 146441764-146460290 protein_coding
  ENST00000613069 PLSCR2-202 146433295-146495991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000463633ENST00000489015ENST00000497985ENST00000610787ENST00000613069
Transcript ID Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000463633 N/A N/A N/A 0.096±0.00 0.252±0.00 N/A N/A N/A 0.092±0.00 0.089±0.00 N/A
ENST00000489015 N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.055±0.00
ENST00000497985 0.040±0.00 N/A 0.008±0.00 0.008±0.00 N/A 0.112±0.00 N/A 0.155±0.00 0.099±0.09 0.021±0.00 N/A
ENST00000610787 N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A N/A N/A 1.389±0.00
ENST00000613069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.746±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0003 CGP 3:146192339-146495991
CIL_00065H CIL_00065H_0004 CGP 3:146391421-146544864

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005634 IEA nucleus
GO:0005886 NAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0017121 NAS phospholipid scrambling
GO:0017128 NAS phospholipid scramblase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045470 FP245465.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000058638 si:ch211-71m22.1 si:ch211-71m22.1 protein_coding Danio_rerio
ENSDARG00000077468 si:ch73-206p6.1 si:ch73-206p6.1 protein_coding Danio_rerio
ENSDARG00000079075 si:ch211-71m22.3 si:ch211-71m22.3 protein_coding Danio_rerio
ENSDARG00000091266 si:ch211-71m22.5 si:ch211-71m22.5 protein_coding Danio_rerio
ENSMUSG00000032369 Plscr1 phospholipid scramblase 1 protein_coding Mus_musculus
ENSMUSG00000032372 Plscr2 phospholipid scramblase 2 protein_coding Mus_musculus
ENSMUSG00000074139 1700057G04Rik RIKEN cDNA 1700057G04 gene protein_coding Mus_musculus

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