C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipid scramblase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032377 Plscr4 10090 + 9:92457373-92492456 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034941 Plscr4-001 92457373-92492456 protein_coding
  ENSMUST00000143866 Plscr4-002 92457394-92485332 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034941ENSMUST00000143866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034941 7.083±0.77 4.319±1.51 10.992±1.17 0.307±0.11 3.780±0.42 1.459±0.38 3.038±0.17 3.867±0.69 0.416±0.19 11.591±0.54 1.153±0.24 4.994±1.33 0.164±0.18 0.339±0.22
ENSMUST00000143866 2.345±0.40 5.122±2.24 N/A 0.487±0.00 1.915±0.69 1.395±0.60 0.865±0.00 1.513±0.75 0.204±0.10 2.643±0.15 N/A 2.929±0.93 0.036±0.03 0.230±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0008 CGP 9:92309377-92492456
CIL_00057Z CIL_00057Z_0002 CGP 9:92457373-92608428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0019899 IEA enzyme binding
GO:0042609 IEA CD4 receptor binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071222 IEP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045470 FP245465.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000058638 si:ch211-71m22.1 si:ch211-71m22.1 protein_coding Danio_rerio
ENSDARG00000077468 si:ch73-206p6.1 si:ch73-206p6.1 protein_coding Danio_rerio
ENSDARG00000079075 si:ch211-71m22.3 si:ch211-71m22.3 protein_coding Danio_rerio
ENSDARG00000091266 si:ch211-71m22.5 si:ch211-71m22.5 protein_coding Danio_rerio
ENSG00000114698 PLSCR4 phospholipid scramblase 4 protein_coding Homo_sapiens

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