C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipid scramblase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034941 Plscr4-001 ENSMUSG00000032377 10090 + 9:92457373-92492456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034941
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034941 7.083±0.77 4.319±1.51 10.992±1.17 0.307±0.11 3.780±0.42 1.459±0.38 3.038±0.17 3.867±0.69 0.416±0.19 11.591±0.54 1.153±0.24 4.994±1.33 0.164±0.18 0.339±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0008 CGP 9:92309377-92492456
CIL_00057Z CIL_00057Z_0002 CGP 9:92457373-92608428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0019899 IEA enzyme binding
GO:0042609 IEA CD4 receptor binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071222 IEP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354952 PLSCR4-001 protein_coding Homo_sapiens 0 952
ENST00000446574 PLSCR4-004 protein_coding Homo_sapiens 0 946
ENST00000460350 PLSCR4-005 protein_coding Homo_sapiens 0 756
ENST00000476202 PLSCR4-007 protein_coding Homo_sapiens 0 601
ENST00000493382 PLSCR4-003 protein_coding Homo_sapiens 0 946

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