C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxia telangiectasia and Rad3 related
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032409 Atr 10090 + 9:95857597-95951644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034980 Atr-001 95857597-95951644 protein_coding
  ENSMUST00000185473 Atr-002 95857639-95904038 retained_intron
  ENSMUST00000186061 Atr-010 95857655-95861755 retained_intron
  ENSMUST00000186127 Atr-007 95888745-95891072 retained_intron
  ENSMUST00000186524 Atr-012 95937170-95940994 retained_intron
  ENSMUST00000186997 Atr-003 95914974-95919131 retained_intron
  ENSMUST00000187356 Atr-005 95857597-95868312 retained_intron
  ENSMUST00000188088 Atr-009 95933945-95935719 retained_intron
  ENSMUST00000188164 Atr-011 95903664-95906348 retained_intron
  ENSMUST00000189602 Atr-006 95857650-95863538 retained_intron
  ENSMUST00000190644 Atr-008 95904521-95906352 retained_intron
  ENSMUST00000191269 Atr-004 95857669-95869904 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034980 1.971±0.52 1.340±0.05 2.322±0.19 2.365±0.73 1.496±0.21 0.814±0.16 0.983±0.11 1.186±0.14 1.156±0.65 1.559±0.21 0.562±0.10 2.201±1.27 2.340±0.74 13.001±5.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000077 IMP DNA damage checkpoint
GO:0001741 IDA XY body
GO:0004672 IDA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005634 TAS nucleus
GO:0006281 IDA DNA repair
GO:0006468 IDA protein phosphorylation
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008156 IEA negative regulation of DNA replication
GO:0016605 IEA PML body
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0032405 IEA MutLalpha complex binding
GO:0032407 IEA MutSalpha complex binding
GO:0034644 IEA cellular response to UV
GO:0042493 IEA response to drug
GO:0043393 IDA regulation of protein binding
GO:0043517 IEA positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0046777 IEA protein autophosphorylation
GO:0071480 IEA cellular response to gamma radiation
GO:0090399 IEA replicative senescence

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079625 atr ataxia telangiectasia and Rad3 related protein_coding Danio_rerio
ENSG00000175054 ATR ATR serine/threonine kinase protein_coding Homo_sapiens

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