C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor Dp 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034982 Tfdp2-002 ENSMUSG00000032411 10090 + 9:96196304-96323646 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034982 0.498±0.00 15.538±1.00 6.837±0.00 3.079±1.77 2.933±1.37 5.424±1.79 3.360±0.00 6.349±0.33 5.141±8.17 7.652±3.58 1.270±0.42 9.500±0.81 1.744±1.06 0.380±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003712 IEA transcription cofactor activity
GO:0005635 TAS nuclear envelope
GO:0005667 IC transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000464782 TFDP2-010 processed_transcript Homo_sapiens 0 200
ENST00000467072 TFDP2-004 protein_coding Homo_sapiens 0 1762
ENST00000467634 TFDP2-013 protein_coding Homo_sapiens 0 244
ENST00000467667 TFDP2-018 protein_coding Homo_sapiens 0 1162
ENST00000471095 TFDP2-017 retained_intron Homo_sapiens 0 292
ENST00000474279 TFDP2-024 protein_coding Homo_sapiens 0 411
ENST00000475734 TFDP2-012 protein_coding Homo_sapiens 0 309
ENST00000476617 TFDP2-014 processed_transcript Homo_sapiens 2e-33 147
ENST00000477292 TFDP2-008 protein_coding Homo_sapiens 0 1652
ENST00000478006 TFDP2-020 protein_coding Homo_sapiens 0 957
ENST00000479040 TFDP2-002 protein_coding Homo_sapiens 0 1685
ENST00000486111 TFDP2-007 protein_coding Homo_sapiens 0 1997
ENST00000487734 TFDP2-006 nonsense_mediated_decay Homo_sapiens 0 1631
ENST00000488107 TFDP2-016 protein_coding Homo_sapiens 0 503
ENST00000489671 TFDP2-001 protein_coding Homo_sapiens 0 2013
ENST00000492919 TFDP2-019 retained_intron Homo_sapiens 0 654
ENST00000493204 TFDP2-022 retained_intron Homo_sapiens 0 366
ENST00000494358 TFDP2-003 protein_coding Homo_sapiens 0 379
ENST00000494656 TFDP2-021 protein_coding Homo_sapiens 0.0000000000005 79
ENST00000495310 TFDP2-005 protein_coding Homo_sapiens 0 1714
ENST00000497579 TFDP2-015 protein_coding Homo_sapiens 0 1066
ENST00000499676 TFDP2-201 protein_coding Homo_sapiens 0 1868
ENST00000602556 TFDP2-001 lincRNA Homo_sapiens 1e-35 156

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