C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062368 Dhx30-009 ENSMUSG00000032480 10090 - 9:110084320-110101087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062368
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062368 8.841±2.71 22.287±3.19 4.094±0.59 13.455±1.29 7.527±1.48 4.060±0.44 6.046±0.96 4.917±1.39 5.980±1.07 4.510±0.99 21.175±6.06 4.585±0.89 10.684±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0002 VISTA 9:109592964-110196468

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0003725 ISO double-stranded RNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0042645 ISS mitochondrial nucleoid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013063 DHX33-201 protein_coding Danio_rerio 0.0002 53
ENSDART00000156224 DHX33-001 protein_coding Danio_rerio 0.0002 53
ENST00000348968 DHX30-005 protein_coding Homo_sapiens 0 4355
ENST00000367012 SERTAD4-001 protein_coding Homo_sapiens 0.0002 53
ENST00000395745 DHX30-003 nonsense_mediated_decay Homo_sapiens 0 4355
ENST00000441384 DHX30-002 nonsense_mediated_decay Homo_sapiens 0 826
ENST00000445061 DHX30-001 protein_coding Homo_sapiens 0 4355
ENST00000446256 DHX30-201 protein_coding Homo_sapiens 0 4355
ENST00000457607 DHX30-007 protein_coding Homo_sapiens 0 4506
ENST00000474183 DHX30-015 retained_intron Homo_sapiens 0 756
ENST00000490620 SERTAD4-003 processed_transcript Homo_sapiens 0.0002 53
ENST00000619982 DHX30-202 protein_coding Homo_sapiens 0 4355

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