C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032512 Wdr48 10090 + 9:119894895-119926579 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036561 Wdr48-201 119894895-119926579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036561 7.545±1.91 11.519±7.40 10.810±1.02 14.070±1.04 7.666±4.04 11.525±1.60 3.418±1.57 8.249±0.58 5.966±2.44 8.593±0.95 2.056±0.78 14.321±2.91 13.003±0.83 38.839±21.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H1 CIL_0006H1_0002 CGP 9:119753763-119926579

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005764 IEA lysosome
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007283 IMP spermatogenesis
GO:0007338 IMP single fertilization
GO:0008584 IMP male gonad development
GO:0016579 ISS protein deubiquitination
GO:0035264 IMP multicellular organism growth
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043588 IMP skin development
GO:0048568 IMP embryonic organ development
GO:0048705 IMP skeletal system morphogenesis
GO:0048872 IMP homeostasis of number of cells
GO:0050679 IMP positive regulation of epithelial cell proliferation
GO:0072520 IMP seminiferous tubule development
GO:1902525 IMP regulation of protein monoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038543 wdr48 WD repeat domain 48 protein_coding Danio_rerio
ENSDARG00000044440 WDR48 (2 of 3) WD repeat domain 48 protein_coding Danio_rerio
ENSDARG00000079195 WDR48 (3 of 3) WD repeat domain 48 protein_coding Danio_rerio
ENSG00000114742 WDR48 WD repeat domain 48 protein_coding Homo_sapiens

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