C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: natural killer tumor recognition sequence
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032525 Nktr 10090 + 9:121719169-121756843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035112 Nktr-001 121719176-121756843 protein_coding
  ENSMUST00000182076 Nktr-016 121752527-121754356 retained_intron
  ENSMUST00000182086 Nktr-012 121731147-121742672 retained_intron
  ENSMUST00000182179 Nktr-003 121719410-121748193 nonsense_mediated_decay
  ENSMUST00000182225 Nktr-006 121719444-121749840 protein_coding
  ENSMUST00000182311 Nktr-010 121719215-121741152 protein_coding
  ENSMUST00000182337 Nktr-007 121719827-121731515 protein_coding
  ENSMUST00000182395 Nktr-011 121729398-121731583 retained_intron
  ENSMUST00000182503 Nktr-013 121750786-121754396 nonsense_mediated_decay
  ENSMUST00000182607 Nktr-015 121751215-121752647 retained_intron
  ENSMUST00000182713 Nktr-014 121751667-121754857 protein_coding
  ENSMUST00000182763 Nktr-009 121719178-121742636 nonsense_mediated_decay
  ENSMUST00000182904 Nktr-005 121719243-121735450 retained_intron
  ENSMUST00000183070 Nktr-002 121719169-121742718 nonsense_mediated_decay
  ENSMUST00000183207 Nktr-008 121719298-121720012 processed_transcript
  ENSMUST00000183311 Nktr-004 121719217-121730013 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035112ENSMUST00000182225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035112 19.039±5.44 8.580±4.53 21.545±3.49 31.578±5.22 13.703±7.72 11.731±5.98 5.560±1.06 8.617±2.18 12.389±5.92 18.368±3.49 7.599±0.47 15.152±8.38 14.705±9.11 21.676±0.72
ENSMUST00000182225 N/A N/A N/A 6.415±0.00 N/A N/A N/A N/A N/A N/A N/A 11.753±0.00 10.987±1.61 33.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000488 CIL_000488_0002 CGP 9:121710389-121756843
CIL_000487 CIL_000487_0002 CGP 9:121719169-121771742

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding
GO:0042277 IEA peptide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059097 nktr natural killer-tumor recognition sequence protein_coding Danio_rerio
ENSG00000114857 NKTR natural killer cell triggering receptor protein_coding Homo_sapiens

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