C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: natural killer tumor recognition sequence
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182763 Nktr-009 ENSMUSG00000032525 10090 + 9:121719178-121742636 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000488 CIL_000488_0002 CGP 9:121710389-121756843
CIL_000487 CIL_000487_0002 CGP 9:121719169-121771742

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000127988 nktr-002 nonsense_mediated_decay Danio_rerio 9.99995e-41 171
ENST00000232978 NKTR-001 protein_coding Homo_sapiens 0 302
ENST00000429888 NKTR-003 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000442970 NKTR-005 protein_coding Homo_sapiens 0 219
ENST00000445842 NKTR-010 protein_coding Homo_sapiens 0 219
ENST00000465584 NKTR-007 retained_intron Homo_sapiens 0 302
ENST00000466553 NKTR-016 retained_intron Homo_sapiens 0 422
ENST00000468735 NKTR-002 retained_intron Homo_sapiens 0 302
ENST00000478488 NKTR-011 retained_intron Homo_sapiens 0 337
ENST00000487466 NKTR-006 retained_intron Homo_sapiens 0 219
ENST00000617821 NKTR-201 protein_coding Homo_sapiens 0 551

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