C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: natural killer tumor recognition sequence
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035112 Nktr-001 ENSMUSG00000032525 10090 + 9:121719176-121756843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035112 19.039±5.44 8.580±4.53 21.545±3.49 31.578±5.22 13.703±7.72 11.731±5.98 5.560±1.06 8.617±2.18 12.389±5.92 18.368±3.49 7.599±0.47 15.152±8.38 14.705±9.11 21.676±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000488 CIL_000488_0002 CGP 9:121710389-121756843
CIL_000487 CIL_000487_0002 CGP 9:121719169-121771742

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding
GO:0042277 IEA peptide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232978 NKTR-001 protein_coding Homo_sapiens 0 2765
ENST00000429888 NKTR-003 nonsense_mediated_decay Homo_sapiens 0 2135
ENST00000442970 NKTR-005 protein_coding Homo_sapiens 0 479
ENST00000445842 NKTR-010 protein_coding Homo_sapiens 0 479
ENST00000460807 NKTR-013 retained_intron Homo_sapiens 0 593
ENST00000465584 NKTR-007 retained_intron Homo_sapiens 0 2060
ENST00000466553 NKTR-016 retained_intron Homo_sapiens 0 219
ENST00000468735 NKTR-002 retained_intron Homo_sapiens 0 1903
ENST00000472258 NKTR-014 retained_intron Homo_sapiens 0 442
ENST00000478488 NKTR-011 retained_intron Homo_sapiens 0 479
ENST00000487466 NKTR-006 retained_intron Homo_sapiens 0 477
ENST00000498730 NKTR-008 retained_intron Homo_sapiens 0 963
ENST00000617821 NKTR-201 protein_coding Homo_sapiens 0 2135

Loading