C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin, type I, domain containing 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046121 Thsd7a-201 ENSMUSG00000032625 10090 - 6:12311610-12749253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046121
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046121 0.873±0.09 0.499±0.07 0.850±0.03 4.564±2.48 0.343±0.09 0.277±0.05 0.529±0.09 1.292±0.07 0.047±0.02 0.323±0.07 0.062±0.03 0.246±0.13 0.090±0.04 0.127±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0002 CGP 6:12311610-13089269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000408005 THSD7A-004 retained_intron Homo_sapiens 0 1210
ENST00000423059 THSD7A-001 protein_coding Homo_sapiens 0 6043
ENST00000497575 THSD7A-003 processed_transcript Homo_sapiens 0 316
ENST00000617773 THSD7A-201 protein_coding Homo_sapiens 0 6026

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